Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41762247 . G A CCDS3937.1:NM_000436.3:c.1304aCc>aTc_NP_000427.1:p.435T>I Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 THR A:397 A:435 8.0 0.057 S -127.0 137.6 8.0 0.057 0.0 HOH
 2.847
 O
 O
THR B:397 B:435 5.0 0.036 S -112.4 124.0 5.0 0.036 0.0 HOH
 4.439
 OG1
 O
THR C:397 C:435 7.0 0.05 S -117.6 126.0 NA NA NA
THR D:397 D:435 12.0 0.086 S -135.3 120.6 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 THR A:396 A:396 5.0 0.036 S -127.4 117.1 5.0 0.036 0.0 HOH
 2.489
 OG1
 O
THR B:396 B:396 2.0 0.014 S -92.6 124.6 2.0 0.014 0.0 HOH
 2.388
 OG1
 O
THR C:396 C:396 5.0 0.036 S -78.6 135.7 NA NA NA
THR D:396 D:396 3.0 0.021 S -90.9 137.3 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 THR A:396 A:435 4.0 0.029 S -97.1 132.1 4.0 0.029 0.0 EMC
HOH
 7.013
2.596
 O
OG1
 HG
O
THR B:396 B:435 6.0 0.043 S -108.5 126.2 6.0 0.043 0.0 HOH
 2.633
 O
 O
THR C:396 C:435 5.0 0.036 S -102.1 131.5 NA NA NA
THR D:396 D:435 9.0 0.064 S -107.6 128.3 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 THR A:396 A:396 2.0 0.014 S -88.7 131.7 2.0 0.014 0.0 K
K
HOH
 8.719
2.481
2.597
 O
O
OG1
 K
K
O
THR B:396 B:396 2.0 0.014 S -92.6 130.4 2.0 0.014 0.0 K
K
HOH
 2.494
8.603
2.670
 O
O
OG1
 K
K
O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 THR A:396 A:396 7.0 0.05 S -103.3 128.2 7.0 0.05 0.0 HOH
 2.814
 OG1
 O
THR B:396 D:396 5.0 0.036 S -100.6 135.2 NA NA NA
THR C:396 C:396 9.0 0.064 S -117.4 117.0 NA NA NA
THR D:396 B:396 4.0 0.029 S -96.2 133.5 4.0 0.029 0.0 HOH
 2.714
 OG1
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 THR A:396 A:396 3.0 0.021 S -89.0 125.9 3.0 0.021 0.0 HOH
 2.466
 O
 O
THR B:396 B:396 4.0 0.029 S -90.1 127.3 4.0 0.029 0.0 HOH
 2.640
 O
 O
THR C:396 C:396 4.0 0.029 S -91.2 126.7 NA NA NA
THR D:396 D:396 4.0 0.029 S -90.4 127.8 NA NA NA
THR E:396 E:396 10.0 0.071 S -109.1 125.0 NA NA NA
THR F:396 F:396 6.0 0.043 S -109.2 125.2 NA NA NA
THR G:396 G:396 7.0 0.05 S -108.1 124.5 NA NA NA
THR H:396 H:396 9.0 0.064 S -108.2 125.1 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:396 A:396 5.0 0.036 S -101.2 131.0 5.0 0.036 0.0 HOH
 2.683
 O
 O
THR B:396 B:396 5.0 0.036 S -92.7 133.6 5.0 0.036 0.0 HOH
 2.574
 OG1
 O
THR C:396 C:396 7.0 0.05 S -96.8 125.0 NA NA NA
THR D:396 D:396 9.0 0.064 S -109.6 134.6 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:396 A:396 3.0 0.021 S -94.7 134.3 3.0 0.021 0.0 HOH
 2.595
 O
 O
THR B:396 B:396 2.0 0.014 S -93.9 130.7 2.0 0.014 0.0 HOH
 2.518
 OG1
 O
THR C:396 C:396 2.0 0.014 S -85.0 135.9 NA NA NA
THR D:396 D:396 3.0 0.021 S -92.3 138.7 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:390 A:396 3.0 0.021 S -98.5 135.0 3.0 0.021 0.0 K
K
HOH
 2.523
8.846
2.578
 O
O
OG1
 K
K
O
THR B:390 B:396 3.0 0.021 S -99.2 134.7 3.0 0.021 0.0 K
HOH
 2.641
2.659
 O
OG1
 K
O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:390 A:396 3.0 0.021 S -115.6 124.7 3.0 0.021 0.0 K
HOH
 2.526
2.732
 O
OG1
 K
O
THR B:390 B:396 3.0 0.021 S -114.1 125.7 3.0 0.021 0.0 K
HOH
 2.548
2.700
 O
OG1
 K
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 THR A:435 A:435 5.0 0.036 S -83.5 129.9