Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41803176 . C A CCDS3937.1:NM_000436.3:c.1045Ggt>Tgt_NP_000427.1:p.349G>C Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 GLY A:311 A:349 11.0 0.147 E 106.9 39.0 8.0 0.107 0.04 B:P55809:0.04
 HOH
 3.280
 C
 O
GLY B:311 B:349 10.0 0.133 E 107.9 34.2 7.0 0.093 0.04 A:P55809:0.04
 HOH
 3.415
 C
 O
GLY C:311 C:349 10.0 0.133 E 107.5 41.0 NA NA NA
GLY D:311 D:349 8.0 0.107 E 106.5 36.3 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 GLY A:310 A:310 6.0 0.08 E 106.6 42.2 3.0 0.04 0.04 B:Q29551:0.04
 HOH
 3.425
 CA
 O
GLY B:310 B:310 7.0 0.093 E 109.7 40.6 3.0 0.04 0.053 A:Q29551:0.053
 HOH
 3.221
 CA
 O
GLY C:310 C:310 5.0 0.067 E 108.2 41.9 NA NA NA
GLY D:310 D:310 6.0 0.08 E 107.8 39.5 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 GLY A:310 A:349 10.0 0.133 E 107.7 38.8 6.0 0.08 0.053 B:Q29551:0.053
 HOH
 3.247
 C
 O
GLY B:310 B:349 9.0 0.12 E 105.2 38.9 6.0 0.08 0.04 A:Q29551:0.04
 HOH
 3.474
 CA
 O
GLY C:310 C:349 9.0 0.12 E 104.8 45.1 NA NA NA
GLY D:310 D:349 9.0 0.12 E 102.0 41.1 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 GLY A:310 A:310 6.0 0.08 E 114.0 35.6 3.0 0.04 0.04 B:Q29551:0.04
 HOH
 3.304
 CA
 O
GLY B:310 B:310 6.0 0.08 E 113.1 34.2 2.0 0.027 0.053 A:Q29551:0.053
 HOH
 3.313
 CA
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 GLY A:310 A:310 8.0 0.107 E 107.3 40.5 3.0 0.04 0.067 D:Q29551:0.067
 HOH
 3.486
 C
 O
GLY B:310 D:310 8.0 0.107 E 110.5 40.8 NA NA NA
GLY C:310 C:310 7.0 0.093 E 112.6 38.7 NA NA NA
GLY D:310 B:310 7.0 0.093 E 102.5 39.4 3.0 0.04 0.053 A:Q29551:0.053
 HOH
 3.428
 CA
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 GLY A:310 A:310 7.0 0.093 E 107.4 36.3 3.0 0.04 0.053 B:Q29551:0.053
 HOH
 3.263
 C
 O
GLY B:310 B:310 8.0 0.107 E 105.5 36.5 4.0 0.053 0.054 A:Q29551:0.053
 HOH
 3.244
 C
 O
GLY C:310 C:310 8.0 0.107 E 107.6 36.4 NA NA NA
GLY D:310 D:310 7.0 0.093 E 107.5 34.9 NA NA NA
GLY E:310 E:310 7.0 0.093 E 108.9 39.7 NA NA NA
GLY F:310 F:310 8.0 0.107 E 109.0 40.0 NA NA NA
GLY G:310 G:310 7.0 0.093 E 109.0 41.7 NA NA NA
GLY H:310 H:310 7.0 0.093 E 109.5 40.2 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:310 A:310 10.0 0.133 E 112.1 30.9 5.0 0.067 0.066 B:Q29551:0.067
 HOH
 3.639
 C
 O
GLY B:310 B:310 12.0 0.16 E 110.6 35.4 6.0 0.08 0.08 A:Q29551:0.08
 HOH
 3.417
 C
 O
GLY C:310 C:310 12.0 0.16 E 104.6 37.8 NA NA NA
GLY D:310 D:310 10.0 0.133 E 108.0 32.0 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:310 A:310 6.0 0.08 E 109.9 37.5 3.0 0.04 0.04 B:Q29551:0.04
 HOH
 3.367
 CA
 O
GLY B:310 B:310 6.0 0.08 E 110.0 41.8 3.0 0.04 0.04 A:Q29551:0.04
 HOH
 3.373
 C
 O
GLY C:310 C:310 5.0 0.067 E 115.1 34.9 NA NA NA
GLY D:310 D:310 4.0 0.053 E 111.8 45.7 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:304 A:310 6.0 0.08 E 109.7 39.7 2.0 0.027 0.053 B:Q29551:0.053
 HOH
 3.310
 C
 O
GLY B:304 B:310 6.0 0.08 E 108.7 34.4 2.0 0.027 0.053 A:Q29551:0.053
 HOH
 3.314
 C
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:304 A:310 7.0 0.093 E 108.8 41.0 4.0 0.053 0.04 B:Q29551:0.04
 HOH
 3.083
 C
 O
GLY B:304 B:310 7.0 0.093 E 112.0 40.9 3.0 0.04 0.053 A:Q29551:0.053
 HOH
 3.428
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 GLY A:349 A:349 6.0 0.08 E 91.8 43.5