Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41805771 . G A CCDS3937.1:NM_000436.3:c.853Cgg>Tgg_NP_000427.1:p.285R>W Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ARG A:247 A:285 110.0 0.489 -58.7 131.2 110.0 0.489 0.0 HOH
 3.284
 NH2
 O
ARG B:247 B:285 192.0 0.853 -61.8 360.0 192.0 0.853 0.0 HOH
 4.362
 CD
 O
ARG C:247 C:285 141.0 0.627 -70.7 360.0 NA NA NA
ARG D:247 D:285 90.0 0.4 -68.0 -175.9 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ARG A:246 A:246 79.0 0.351 -131.8 151.2 79.0 0.351 0.0 HOH
 7.570
 NH1
 O
ARG B:246 B:246 76.0 0.338 -131.2 150.8 76.0 0.338 0.0 HOH
 4.229
 CA
 O
ARG C:246 C:246 77.0 0.342 -131.3 151.0 NA NA NA
ARG D:246 D:246 78.0 0.347 -131.6 151.8 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ARG A:246 A:285 105.0 0.467 -99.1 167.3 105.0 0.467 0.0 HOH
 5.179
 NH2
 O
ARG B:246 B:285 99.0 0.44 -103.6 155.3 99.0 0.44 0.0 HOH
 5.805
 N
 O
ARG C:246 C:285 145.0 0.644 -104.3 360.0 NA NA NA
ARG D:246 NA:NA DO NA DO DO DO NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ARG A:246 NA:NA DO NA DO DO DO NA NA NA
ARG B:246 B:246 86.0 0.382 -98.6 156.4 86.0 0.382 0.0 HOH
 2.782
 O
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ARG A:246 A:246 169.0 0.751 -91.3 360.0 169.0 0.751 0.0 HOH
 2.851
 NE
 O
ARG B:246 D:246 92.0 0.409 -94.4 151.8 NA NA NA
ARG C:246 C:246 195.0 0.867 -85.8 360.0 NA NA NA
ARG D:246 B:246 149.0 0.662 -93.1 360.0 149.0 0.662 0.0 HOH
 3.601
 O
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ARG A:246 A:246 89.0 0.396 -99.7 148.7 89.0 0.396 0.0 HOH
 7.549
 NH2
 O
ARG B:246 B:246 95.0 0.422 -116.8 153.4 95.0 0.422 0.0 HOH
 9.579
 N
 O
ARG C:246 C:246 153.0 0.68 -99.2 360.0 NA NA NA
ARG D:246 D:246 163.0 0.724 -71.5 360.0 NA NA NA
ARG E:246 E:246 156.0 0.693 -135.6 360.0 NA NA NA
ARG F:246 F:246 144.0 0.64 -111.0 360.0 NA NA NA
ARG G:246 NA:NA DO NA DO DO DO NA NA NA
ARG H:246 H:246 156.0 0.693 -109.3 360.0 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:246 A:246 103.0 0.458 -125.0 -179.2 103.0 0.458 0.0 HOH
 7.701
 NH2
 O
ARG B:246 B:246 64.0 0.284 -116.7 134.3 64.0 0.284 0.0 HOH
 8.303
 NH1
 O
ARG C:246 C:246 105.0 0.467 -150.4 164.7 NA NA NA
ARG D:246 D:246 89.0 0.396 -87.1 145.9 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:246 A:246 103.0 0.458 -154.6 157.1 103.0 0.458 0.0 HOH
 3.863
 O
 O
ARG B:246 B:246 88.0 0.391 -112.5 150.8 88.0 0.391 0.0 HOH
 2.859
 O
 O
ARG C:246 C:246 90.0 0.4 B -97.8 161.3 NA NA NA
ARG D:246 D:246 88.0 0.391 -88.0 176.3 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:246 A:246 164.0 0.729 -65.3 360.0 164.0 0.729 0.0 HOH
 2.392
 NH2
 O
ARG B:246 B:246 158.0 0.702 -63.7 360.0 158.0 0.702 0.0 HOH
 2.562
 O
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:246 A:246 172.0 0.764 -65.6 360.0 172.0 0.764 0.0 HOH
 9.018
 NH1
 O
ARG B:246 B:246 170.0 0.756 -67.4 360.0 170.0 0.756 0.0 HOH
 5.475
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ARG A:285 A:285 81.0 0.36 -83.7 138.2