Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41805776 . G A CCDS3937.1:NM_000436.3:c.848tCa>tTa_NP_000427.1:p.283S>L Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 SER A:245 A:283 20.0 0.174 -106.1 107.8 20.0 0.174 0.0 HOH
 5.588
 N
 O
SER B:245 B:283 24.0 0.209 -104.1 104.3 24.0 0.209 0.0 HOH
 6.391
 O
 O
SER C:245 C:283 20.0 0.174 -111.2 110.3 NA NA NA
SER D:245 D:283 20.0 0.174 -117.7 138.9 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 SER A:244 A:244 23.0 0.2 -126.1 101.0 23.0 0.2 0.0 HOH
 3.840
 OG
 O
SER B:244 B:244 23.0 0.2 -126.4 102.4 23.0 0.2 0.0 HOH
 2.543
 OG
 O
SER C:244 C:244 24.0 0.209 -126.0 101.7 NA NA NA
SER D:244 D:244 24.0 0.209 -125.6 102.3 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 SER A:244 A:283 19.0 0.165 -117.6 103.8 19.0 0.165 0.0 HOH
 6.000
 C
 O
SER B:244 B:283 22.0 0.191 -116.9 84.5 22.0 0.191 0.0 HOH
 3.594
 CA
 O
SER C:244 C:283 21.0 0.183 -124.6 104.3 NA NA NA
SER D:244 NA:NA DO NA DO DO DO NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 SER A:244 NA:NA DO NA DO DO DO NA NA NA
SER B:244 B:244 20.0 0.174 -120.5 120.6 20.0 0.174 0.0 HOH
 2.947
 OG
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 SER A:244 A:244 19.0 0.165 -121.3 104.6 19.0 0.165 0.0 HOH
 3.430
 CA
 O
SER B:244 D:244 18.0 0.157 -124.2 111.7 NA NA NA
SER C:244 C:244 15.0 0.13 -125.8 117.8 NA NA NA
SER D:244 B:244 20.0 0.174 -115.6 111.2 20.0 0.174 0.0 HOH
 5.629
 N
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 SER A:244 A:244 21.0 0.183 -135.0 117.3 21.0 0.183 0.0 HOH
 6.187
 N
 O
SER B:244 B:244 21.0 0.183 -135.7 94.4 21.0 0.183 0.0 HOH
 2.680
 OG
 O
SER C:244 C:244 22.0 0.191 -116.0 110.7 NA NA NA
SER D:244 D:244 20.0 0.174 -119.7 100.7 NA NA NA
SER E:244 E:244 23.0 0.2 -117.9 114.4 NA NA NA
SER F:244 F:244 20.0 0.174 -128.7 127.3 NA NA NA
SER G:244 G:244 24.0 0.209 -121.4 101.9 NA NA NA
SER H:244 H:244 22.0 0.191 -142.8 111.8 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 SER A:244 A:244 16.0 0.139 -94.2 112.5 16.0 0.139 0.0 HOH
 5.910
 N
 O
SER B:244 B:244 20.0 0.174 -122.4 108.2 20.0 0.174 0.0 HOH
 6.329
 O
 O
SER C:244 C:244 17.0 0.148 -127.4 116.6 NA NA NA
SER D:244 D:244 20.0 0.174 -114.0 104.8 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 SER A:244 A:244 21.0 0.183 -102.0 89.8 21.0 0.183 0.0 HOH
 4.428
 OG
 O
SER B:244 B:244 17.0 0.148 -117.0 106.6 17.0 0.148 0.0 HOH
 3.807
 C
 O
SER C:244 C:244 18.0 0.157 -116.0 113.9 NA NA NA
SER D:244 D:244 19.0 0.165 -123.4 107.5 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 SER A:244 A:244 19.0 0.165 -118.3 116.1 19.0 0.165 0.0 HOH
 3.003
 OG
 O
SER B:244 B:244 21.0 0.183 -124.6 115.0 21.0 0.183 0.0 HOH
 4.511
 C
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 SER A:244 A:244 20.0 0.174 -125.6 110.2 20.0 0.174 0.0 HOH
 6.313
 O
 O
SER B:244 B:244 20.0 0.174 -122.0 109.6 20.0 0.174 0.0 HOH
 5.789
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 SER A:283 A:283 22.0 0.191 -116.0 119.2