Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41807470 . C A CCDS3937.1:NM_000436.3:c.803cGc>cTc_NP_000427.1:p.268R>L Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ARG A:230 A:268 36.0 0.16 E -134.4 132.6 36.0 0.16 0.0 HOH
 3.072
 NE
 O
ARG B:230 B:268 38.0 0.169 E -128.1 137.9 38.0 0.169 0.0 HOH
 3.050
 NE
 O
ARG C:230 C:268 32.0 0.142 E -133.3 135.0 NA NA NA
ARG D:230 D:268 33.0 0.147 E -144.2 139.2 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ARG A:229 A:229 38.0 0.169 E -127.7 130.4 38.0 0.169 0.0 HOH
 2.719
 NE
 O
ARG B:229 B:229 37.0 0.164 E -127.9 129.2 37.0 0.164 0.0 HOH
 3.039
 NH2
 O
ARG C:229 C:229 37.0 0.164 E -127.2 130.5 NA NA NA
ARG D:229 D:229 38.0 0.169 E -127.4 131.3 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ARG A:229 A:268 34.0 0.151 E -129.9 133.6 34.0 0.151 0.0 HOH
 3.288
 NE
 O
ARG B:229 B:268 34.0 0.151 E -126.8 134.5 34.0 0.151 0.0 HOH
 2.880
 NE
 O
ARG C:229 C:268 33.0 0.147 E -128.7 131.2 NA NA NA
ARG D:229 D:268 35.0 0.156 E -131.0 136.7 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ARG A:229 A:229 34.0 0.151 E -128.6 137.5 34.0 0.151 0.0 HOH
 2.863
 NE
 O
ARG B:229 B:229 36.0 0.16 E -127.6 137.5 36.0 0.16 0.0 HOH
 2.793
 NE
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ARG A:229 A:229 35.0 0.156 E -134.1 133.4 35.0 0.156 0.0 HOH
 3.044
 NE
 O
ARG B:229 D:229 37.0 0.164 E -132.4 135.0 NA NA NA
ARG C:229 C:229 31.0 0.138 E -137.2 134.6 NA NA NA
ARG D:229 B:229 36.0 0.16 E -136.5 137.1 36.0 0.16 0.0 HOH
 2.991
 NE
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ARG A:229 A:229 38.0 0.169 E -132.7 133.4 38.0 0.169 0.0 HOH
 6.398
 N
 O
ARG B:229 B:229 38.0 0.169 E -132.2 131.7 38.0 0.169 0.0 HOH
 6.689
 N
 O
ARG C:229 C:229 38.0 0.169 E -132.6 133.1 NA NA NA
ARG D:229 D:229 39.0 0.173 E -131.6 132.5 NA NA NA
ARG E:229 E:229 39.0 0.173 E -131.1 132.9 NA NA NA
ARG F:229 F:229 39.0 0.173 E -132.5 133.6 NA NA NA
ARG G:229 G:229 38.0 0.169 E -132.3 133.4 NA NA NA
ARG H:229 H:229 39.0 0.173 E -132.2 132.4 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:229 A:229 37.0 0.164 E -128.5 136.4 37.0 0.164 0.0 HOH
 8.233
 CA
 O
ARG B:229 B:229 38.0 0.169 E -128.4 132.9 38.0 0.169 0.0 HOH
 3.047
 NE
 O
ARG C:229 C:229 37.0 0.164 E -128.4 125.8 NA NA NA
ARG D:229 D:229 38.0 0.169 E -129.3 139.9 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:229 A:229 34.0 0.151 E -128.2 135.9 34.0 0.151 0.0 HOH
 3.097
 NE
 O
ARG B:229 B:229 34.0 0.151 E -129.8 134.6 34.0 0.151 0.0 HOH
 3.880
 NH1
 O
ARG C:229 C:229 35.0 0.156 E -133.8 132.2 NA NA NA
ARG D:229 D:229 32.0 0.142 E -121.4 129.9 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:229 A:229 35.0 0.156 E -131.5 135.1 35.0 0.156 0.0 HOH
 2.874
 NE
 O
ARG B:229 B:229 34.0 0.151 E -132.8 136.4 34.0 0.151 0.0 HOH
 2.971
 NE
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:229 A:229 33.0 0.147 E -135.3 134.7 33.0 0.147 0.0 HOH
 3.257
 NE
 O
ARG B:229 B:229 34.0 0.151 E -136.5 137.0 34.0 0.151 0.0 HOH
 2.997
 NE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ARG A:268 A:268 31.0 0.138 E -128.3 137.2