Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41842792 . C A CCDS3937.1:NM_000436.3:c.656gGa>gTa_NP_000427.1:p.219G>V Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 GLY A:181 A:219 0.0 0.0 96.1 12.6 0.0 0.0 0.0 HOH
 5.920
 O
 O
GLY B:181 B:219 0.0 0.0 S 101.6 2.3 0.0 0.0 0.0 HOH
 5.772
 CA
 O
GLY C:181 C:219 0.0 0.0 S 99.9 7.5 NA NA NA
GLY D:181 D:219 0.0 0.0 100.8 9.0 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 GLY A:180 A:180 0.0 0.0 114.8 -4.1 0.0 0.0 0.0 HOH
 5.492
 N
 O
GLY B:180 B:180 0.0 0.0 114.8 -3.3 0.0 0.0 0.0 HOH
 5.769
 N
 O
GLY C:180 C:180 0.0 0.0 114.8 -3.0 NA NA NA
GLY D:180 D:180 0.0 0.0 114.9 -2.7 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 GLY A:180 A:219 0.0 0.0 S 117.0 -2.6 0.0 0.0 0.0 HOH
 6.842
 C
 O
GLY B:180 B:219 0.0 0.0 S 116.1 -3.7 0.0 0.0 0.0 HOH
 6.918
 C
 O
GLY C:180 C:219 0.0 0.0 S 107.7 -1.9 NA NA NA
GLY D:180 D:219 0.0 0.0 S 115.7 -1.5 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 GLY A:180 A:180 0.0 0.0 S 101.9 7.1 0.0 0.0 0.0 HOH
 4.622
 N
 O
GLY B:180 B:180 0.0 0.0 S 99.2 4.0 0.0 0.0 0.0 HOH
 4.539
 N
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 GLY A:180 A:180 0.0 0.0 98.5 4.0 0.0 0.0 0.0 HOH
 4.455
 N
 O
GLY B:180 D:180 0.0 0.0 S 100.3 1.5 NA NA NA
GLY C:180 C:180 0.0 0.0 S 103.7 2.0 NA NA NA
GLY D:180 B:180 0.0 0.0 S 98.6 6.4 0.0 0.0 0.0 HOH
 4.462
 N
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 GLY A:180 A:180 0.0 0.0 S 109.8 -3.5 0.0 0.0 0.0 HOH
 5.900
 CA
 O
GLY B:180 B:180 0.0 0.0 S 109.5 -2.7 0.0 0.0 0.0 HOH
 6.214
 CA
 O
GLY C:180 C:180 0.0 0.0 S 110.1 -2.2 NA NA NA
GLY D:180 D:180 0.0 0.0 S 109.9 -2.7 NA NA NA
GLY E:180 E:180 0.0 0.0 S 109.8 -2.1 NA NA NA
GLY F:180 F:180 0.0 0.0 S 109.7 -1.5 NA NA NA
GLY G:180 G:180 0.0 0.0 S 110.8 -1.9 NA NA NA
GLY H:180 H:180 0.0 0.0 S 110.5 -2.3 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:180 A:180 0.0 0.0 S 110.6 6.9 0.0 0.0 0.0 HOH
 6.662
 C
 O
GLY B:180 B:180 0.0 0.0 114.7 -1.6 0.0 0.0 0.0 HOH
 6.721
 C
 O
GLY C:180 C:180 0.0 0.0 S 125.4 -9.5 NA NA NA
GLY D:180 D:180 0.0 0.0 S 117.9 -1.1 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:180 A:180 0.0 0.0 S 117.2 -10.0 0.0 0.0 0.0 HOH
 6.107
 CA
 O
GLY B:180 B:180 0.0 0.0 111.0 9.0 0.0 0.0 0.0 HOH
 4.611
 N
 O
GLY C:180 C:180 0.0 0.0 S 100.0 4.9 NA NA NA
GLY D:180 D:180 0.0 0.0 S 110.0 -1.1 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:180 A:180 0.0 0.0 S 102.1 3.6 0.0 0.0 0.0 HOH
 4.428
 N
 O
GLY B:180 B:180 0.0 0.0 S 103.6 6.1 0.0 0.0 0.0 HOH
 4.501
 N
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:180 A:180 0.0 0.0 S 102.4 7.3 0.0 0.0 0.0 HOH
 6.876
 C
 O
GLY B:180 B:180 0.0 0.0 S 102.4 7.4 0.0 0.0 0.0 HOH
 6.530
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 GLY A:219 A:219 0.0 0.0 100.5 4.9