Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41842799 . G A CCDS3937.1:NM_000436.3:c.649Cga>Tga_NP_000427.1:p.217R>* Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ARG A:179 A:217 139.0 0.618 T -74.5 -1.5 139.0 0.618 0.0 HOH
 3.553
 CD
 O
ARG B:179 B:217 132.0 0.587 T -76.4 -4.8 132.0 0.587 0.0 HOH
 6.601
 N
 O
ARG C:179 C:217 131.0 0.582 T -77.4 0.4 NA NA NA
ARG D:179 D:217 133.0 0.591 T -74.9 -2.8 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 GLN A:178 A:178 119.0 0.661 T -66.5 -3.6 119.0 0.661 0.0 HOH
 4.102
 CD
 O
GLN B:178 B:178 119.0 0.661 T -65.3 -3.4 119.0 0.661 0.0 HOH
 3.040
 NE2
 O
GLN C:178 C:178 121.0 0.672 T -66.4 -3.7 NA NA NA
GLN D:178 D:178 121.0 0.672 T -66.3 -3.2 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 GLN A:178 A:217 102.0 0.567 T -64.6 -10.6 102.0 0.567 0.0 HOH
 6.392
 N
 O
GLN B:178 B:217 105.0 0.583 T -70.5 -10.8 105.0 0.583 0.0 HOH
 3.901
 CG
 O
GLN C:178 C:217 99.0 0.55 T -64.5 -19.6 NA NA NA
GLN D:178 D:217 100.0 0.556 T -69.8 -9.4 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 GLN A:178 A:178 98.0 0.544 T -69.5 -6.9 98.0 0.544 0.0 HOH
 2.642
 OE1
 O
GLN B:178 B:178 101.0 0.561 T -70.7 -8.7 101.0 0.561 0.0 HOH
 3.219
 OE1
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 GLN A:178 A:178 118.0 0.656 T -71.6 -3.9 118.0 0.656 0.0 HOH
 2.387
 OE1
 O
GLN B:178 D:178 113.0 0.628 T -68.4 -6.5 NA NA NA
GLN C:178 C:178 108.0 0.6 T -68.6 -10.1 NA NA NA
GLN D:178 B:178 116.0 0.644 T -69.4 -4.6 116.0 0.644 0.0 HOH
 2.461
 NE2
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 GLN A:178 A:178 108.0 0.6 T -68.3 -14.6 108.0 0.6 0.0 HOH
 8.564
 O
 O
GLN B:178 B:178 103.0 0.572 T -72.0 -10.8 103.0 0.572 0.0 HOH
 9.169
 O
 O
GLN C:178 C:178 114.0 0.633 T -74.7 -2.2 NA NA NA
GLN D:178 D:178 102.0 0.567 T -68.3 -14.6 NA NA NA
GLN E:178 E:178 112.0 0.622 T -72.3 -13.9 NA NA NA
GLN F:178 F:178 130.0 0.722 T -74.0 -12.2 NA NA NA
GLN G:178 G:178 119.0 0.661 T -74.9 -7.3 NA NA NA
GLN H:178 H:178 136.0 0.756 T -77.2 -4.6 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLN A:178 A:178 103.0 0.572 T -70.1 -5.9 103.0 0.572 0.0 HOH
 6.372
 N
 O
GLN B:178 B:178 101.0 0.561 T -61.5 -4.1 101.0 0.561 0.0 HOH
 6.391
 N
 O
GLN C:178 C:178 106.0 0.589 T -66.2 5.6 NA NA NA
GLN D:178 D:178 107.0 0.594 T -71.3 -2.1 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLN A:178 A:178 105.0 0.583 T -63.8 -9.7 105.0 0.583 0.0 HOH
 6.424
 C
 O
GLN B:178 B:178 113.0 0.628 T -76.8 2.4 113.0 0.628 0.0 HOH
 2.916
 OE1
 O
GLN C:178 C:178 110.0 0.611 T -68.7 -14.1 NA NA NA
GLN D:178 D:178 115.0 0.639 T -70.4 -2.7 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLN A:178 A:178 112.0 0.622 T -69.7 -7.4 112.0 0.622 0.0 HOH
 2.935
 OE1
 O
GLN B:178 B:178 107.0 0.594 T -67.3 -11.2 107.0 0.594 0.0 HOH
 2.816
 OE1
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLN A:178 A:178 107.0 0.594 T -69.1 -6.1 107.0 0.594 0.0 HOH
 6.255
 N
 O
GLN B:178 B:178 106.0 0.589 T -70.0 -7.4 106.0 0.589 0.0 HOH
 6.182
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ARG A:217 A:217 130.0 0.578 T -69.2 -2.3