Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41850272 . C A CCDS3937.1:NM_000436.3:c.424Gca>Tca_NP_000427.1:p.142A>S Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ALA A:104 A:142 0.0 0.0 H -51.7 -51.1 0.0 0.0 0.0 HOH
 4.729
 CB
 O
ALA B:104 B:142 0.0 0.0 H -55.1 -48.1 0.0 0.0 0.0 HOH
 4.820
 CB
 O
ALA C:104 C:142 0.0 0.0 H -67.4 -38.7 NA NA NA
ALA D:104 D:142 0.0 0.0 H -65.6 -44.1 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ALA A:103 A:103 0.0 0.0 H -64.8 -48.1 0.0 0.0 0.0 HOH
 4.651
 CB
 O
ALA B:103 B:103 0.0 0.0 H -64.1 -47.0 0.0 0.0 0.0 HOH
 4.224
 CB
 O
ALA C:103 C:103 0.0 0.0 H -65.7 -46.7 NA NA NA
ALA D:103 D:103 0.0 0.0 H -64.8 -47.7 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ALA A:103 A:142 0.0 0.0 H -63.1 -43.0 0.0 0.0 0.0 HOH
 7.165
 N
 O
ALA B:103 B:142 0.0 0.0 H -62.0 -45.6 0.0 0.0 0.0 HOH
 4.709
 CB
 O
ALA C:103 C:142 0.0 0.0 H -65.7 -41.7 NA NA NA
ALA D:103 D:142 0.0 0.0 H -58.9 -45.6 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ALA A:103 A:103 0.0 0.0 H -63.2 -43.2 0.0 0.0 0.0 HOH
 4.497
 CB
 O
ALA B:103 B:103 0.0 0.0 H -66.8 -40.8 0.0 0.0 0.0 HOH
 4.368
 CB
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ALA A:103 A:103 0.0 0.0 H -59.3 -42.4 0.0 0.0 0.0 HOH
 4.648
 CB
 O
ALA B:103 D:103 0.0 0.0 H -65.4 -42.5 NA NA NA
ALA C:103 C:103 0.0 0.0 H -61.4 -46.4 NA NA NA
ALA D:103 B:103 0.0 0.0 H -62.7 -43.0 0.0 0.0 0.0 HOH
 4.574
 CB
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ALA A:103 A:103 0.0 0.0 H -67.9 -41.8 0.0 0.0 0.0 HOH
 4.697
 CB
 O
ALA B:103 B:103 0.0 0.0 H -68.2 -42.1 0.0 0.0 0.0 HOH
 6.150
 CB
 O
ALA C:103 C:103 0.0 0.0 H -68.6 -42.4 NA NA NA
ALA D:103 D:103 0.0 0.0 H -68.9 -42.3 NA NA NA
ALA E:103 E:103 0.0 0.0 H -70.9 -41.6 NA NA NA
ALA F:103 F:103 0.0 0.0 H -67.7 -41.2 NA NA NA
ALA G:103 G:103 0.0 0.0 H -69.5 -42.0 NA NA NA
ALA H:103 H:103 0.0 0.0 H -68.8 -41.0 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ALA A:103 A:103 0.0 0.0 H -67.6 -38.2 0.0 0.0 0.0 HOH
 4.786
 C
 O
ALA B:103 B:103 0.0 0.0 H -64.2 -47.9 0.0 0.0 0.0 HOH
 6.294
 CB
 O
ALA C:103 C:103 0.0 0.0 H -63.7 -47.8 NA NA NA
ALA D:103 D:103 0.0 0.0 H -62.4 -38.9 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ALA A:103 A:103 0.0 0.0 H -65.0 -47.0 0.0 0.0 0.0 HOH
 4.680
 C
 O
ALA B:103 B:103 0.0 0.0 H -57.5 -44.5 0.0 0.0 0.0 HOH
 4.431
 CB
 O
ALA C:103 C:103 0.0 0.0 H -56.3 -44.6 NA NA NA
ALA D:103 D:103 0.0 0.0 H -68.2 -48.4 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ALA A:103 A:103 0.0 0.0 H -63.2 -41.6 0.0 0.0 0.0 HOH
 4.744
 CB
 O
ALA B:103 B:103 0.0 0.0 H -63.5 -45.4 0.0 0.0 0.0 HOH
 4.752
 CB
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ALA A:103 A:103 0.0 0.0 H -63.5 -46.2 0.0 0.0 0.0 HOH
 4.705
 CB
 O
ALA B:103 B:103 0.0 0.0 H -61.2 -50.9 0.0 0.0 0.0 HOH
 4.301
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ALA A:142 A:142 0.0 0.0 H -62.1 -42.4