Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41853565 . G A CCDS3937.1:NM_000436.3:c.370Cga>Tga_NP_000427.1:p.124R>* Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ARG A:86 A:124 99.0 0.44 H -61.3 -45.4 99.0 0.44 0.0 HOH
 7.166
 O
 O
ARG B:86 B:124 122.0 0.542 H -62.0 -43.3 122.0 0.542 0.0
ARG C:86 C:124 111.0 0.493 H -65.0 -36.6 NA NA NA
ARG D:86 D:124 112.0 0.498 H -64.4 -61.0 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ARG A:85 A:85 106.0 0.471 H -63.9 -65.3 106.0 0.471 0.0 HOH
 4.072
 CD
 O
ARG B:85 B:85 112.0 0.498 H -55.1 -49.4 112.0 0.498 0.0 HOH
 2.687
 O
 O
ARG C:85 C:85 97.0 0.431 H -55.1 -48.1 NA NA NA
ARG D:85 D:85 99.0 0.44 H -55.8 -53.6 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ARG A:85 A:124 161.0 0.716 H -69.7 -46.3 161.0 0.716 0.0 HOH
 3.086
 NH1
 O
ARG B:85 B:124 106.0 0.471 H -54.1 -62.6 106.0 0.471 0.0 HOH
 2.951
 CG
 O
ARG C:85 C:124 130.0 0.578 H -54.7 -49.6 NA NA NA
ARG D:85 D:124 108.0 0.48 H -62.3 -56.9 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ARG A:85 A:85 95.0 0.422 H -57.9 -47.1 95.0 0.422 0.0 HOH
 2.689
 O
 O
ARG B:85 B:85 91.0 0.404 H -59.8 -49.5 91.0 0.404 0.0 HOH
 2.674
 O
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ARG A:85 A:85 94.0 0.418 H -66.7 -48.7 94.0 0.418 0.0 HOH
 2.871
 O
 O
ARG B:85 D:85 102.0 0.453 H -61.3 -54.0 NA NA NA
ARG C:85 C:85 162.0 0.72 H -57.8 -49.8 NA NA NA
ARG D:85 B:85 179.0 0.796 H -58.9 -46.0 179.0 0.796 0.0 HOH
 2.895
 O
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ARG A:85 A:85 101.0 0.449 H -61.8 -55.7 101.0 0.449 0.0 HOH
 7.499
 O
 O
ARG B:85 B:85 100.0 0.444 H -61.0 -55.6 100.0 0.444 0.0 HOH
 7.798
 NH2
 O
ARG C:85 C:85 103.0 0.458 H -60.3 -56.3 NA NA NA
ARG D:85 D:85 103.0 0.458 H -61.0 -55.9 NA NA NA
ARG E:85 E:85 103.0 0.458 H -61.2 -56.5 NA NA NA
ARG F:85 F:85 100.0 0.444 H -62.1 -56.0 NA NA NA
ARG G:85 G:85 100.0 0.444 H -61.4 -55.7 NA NA NA
ARG H:85 H:85 102.0 0.453 H -61.1 -56.2 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:85 A:85 109.0 0.484 H -64.4 -49.8 109.0 0.484 0.0 HOH
 7.062
 O
 O
ARG B:85 B:85 96.0 0.427 H -60.7 -50.1 96.0 0.427 0.0 HOH
 7.195
 O
 O
ARG C:85 C:85 108.0 0.48 H -51.9 -54.8 NA NA NA
ARG D:85 D:85 96.0 0.427 H -60.1 -58.5 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:85 A:85 104.0 0.462 H -52.9 -52.1 104.0 0.462 0.0 HOH
 6.658
 O
 O
ARG B:85 B:85 100.0 0.444 H -61.4 -53.4 100.0 0.444 0.0 HOH
 2.893
 O
 O
ARG C:85 C:85 100.0 0.444 H -54.6 -49.7 NA NA NA
ARG D:85 D:85 100.0 0.444 H -56.3 -49.5 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:85 A:85 95.0 0.422 H -58.6 -50.2 95.0 0.422 0.0 HOH
 3.689
 CD
 O
ARG B:85 B:85 102.0 0.453 H -55.9 -52.1 102.0 0.453 0.0 HOH
 3.756
 CD
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:85 A:85 102.0 0.453 H -63.7 -50.3 102.0 0.453 0.0 HOH
 6.777
 O
 O
ARG B:85 B:85 103.0 0.458 H -61.5 -51.8 103.0 0.458 0.0 HOH
 6.754
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ARG A:124 A:124 103.0 0.458 H -60.0 -50.6