Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41861501 . C A CCDS3937.1:NM_000436.3:c.193Ggg>Tgg_NP_000427.1:p.65G>W Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 GLY A:27 A:65 3.0 0.04 T 61.8 -134.6 3.0 0.04 0.0 HOH
 2.718
 O
 O
GLY B:27 B:65 3.0 0.04 T 62.3 -133.8 3.0 0.04 0.0 HOH
 2.640
 O
 O
GLY C:27 C:65 3.0 0.04 T 61.2 -128.6 NA NA NA
GLY D:27 D:65 5.0 0.067 T 66.6 -134.3 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 GLY A:26 A:26 4.0 0.053 T 64.2 -118.5 4.0 0.053 0.0 HOH
 3.741
 C
 O
GLY B:26 B:26 5.0 0.067 T 61.9 -119.5 5.0 0.067 0.0 HOH
 2.690
 O
 O
GLY C:26 C:26 4.0 0.053 T 61.7 -118.1 NA NA NA
GLY D:26 D:26 5.0 0.067 T 62.8 -118.3 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 GLY A:26 A:65 5.0 0.067 T 66.7 -124.2 5.0 0.067 0.0 HOH
 3.266
 CA
 O
GLY B:26 B:65 4.0 0.053 T 65.6 -124.3 4.0 0.053 0.0 HOH
 4.473
 N
 O
GLY C:26 C:65 4.0 0.053 T 66.2 -119.9 NA NA NA
GLY D:26 D:65 4.0 0.053 T 65.0 -121.5 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 GLY A:26 A:26 3.0 0.04 T 59.4 -131.1 3.0 0.04 0.0 HOH
 2.572
 O
 O
GLY B:26 B:26 3.0 0.04 T 61.8 -132.3 3.0 0.04 0.0 HOH
 2.634
 O
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 GLY A:26 A:26 4.0 0.053 T 55.4 -126.3 4.0 0.053 0.0 CL
HOH
 6.216
2.553
 N
O
 CL
O
GLY B:26 D:26 4.0 0.053 T 64.1 -130.4 NA NA NA
GLY C:26 C:26 4.0 0.053 T 59.1 -128.0 NA NA NA
GLY D:26 B:26 5.0 0.067 T 59.7 -126.2 5.0 0.067 0.0 HOH
 2.651
 O
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 GLY A:26 A:26 5.0 0.067 T 55.9 -115.1 5.0 0.067 0.0 HOH
 2.370
 O
 O
GLY B:26 B:26 5.0 0.067 T 57.1 -115.1 5.0 0.067 0.0 CL
HOH
 6.273
2.405
 N
O
 CL
O
GLY C:26 C:26 4.0 0.053 T 57.1 -115.4 NA NA NA
GLY D:26 D:26 5.0 0.067 T 56.7 -115.0 NA NA NA
GLY E:26 E:26 4.0 0.053 T 57.7 -114.6 NA NA NA
GLY F:26 F:26 4.0 0.053 T 57.3 -114.6 NA NA NA
GLY G:26 G:26 4.0 0.053 T 57.0 -115.3 NA NA NA
GLY H:26 H:26 4.0 0.053 T 56.4 -114.6 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:26 A:26 5.0 0.067 T 69.8 -129.2 5.0 0.067 0.0 HOH
 2.777
 O
 O
GLY B:26 B:26 4.0 0.053 T 68.0 -136.3 4.0 0.053 0.0 HOH
 2.599
 O
 O
GLY C:26 C:26 3.0 0.04 T 62.2 -130.1 NA NA NA
GLY D:26 D:26 4.0 0.053 T 71.2 -135.0 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLY A:26 A:26 2.0 0.027 T 63.0 -120.4 2.0 0.027 0.0 CL
HOH
 5.978
2.501
 N
O
 CL
O
GLY B:26 B:26 3.0 0.04 T 66.8 -137.9 3.0 0.04 0.0 HOH
 2.395
 O
 O
GLY C:26 C:26 3.0 0.04 T 63.6 -128.3 NA NA NA
GLY D:26 D:26 3.0 0.04 T 68.2 -129.1 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:26 A:26 3.0 0.04 T 58.5 -130.6 3.0 0.04 0.0 HOH
 2.560
 O
 O
GLY B:26 B:26 3.0 0.04 T 59.0 -131.6 3.0 0.04 0.0 HOH
 2.669
 O
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLY A:26 A:26 4.0 0.053 T 59.9 -127.5 4.0 0.053 0.0 HOH
 2.678
 O
 O
GLY B:26 B:26 3.0 0.04 T 63.7 -125.5 3.0 0.04 0.0 HOH
 2.760
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 GLY A:65 A:65 5.0 0.067 T 57.3 -117.8