Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41862758 . G A CCDS3937.1:NM_000436.3:c.173aCg>aTg_NP_000427.1:p.58T>M Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 THR A:20 A:58 41.0 0.293 E -90.1 119.4 41.0 0.293 0.0 HOH
 2.674
 OG1
 O
THR B:20 B:58 39.0 0.279 E -88.4 121.3 39.0 0.279 0.0 HOH
 7.328
 O
 O
THR C:20 C:58 39.0 0.279 E -90.7 121.3 NA NA NA
THR D:20 D:58 38.0 0.271 E -91.8 119.4 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 THR A:19 A:19 39.0 0.279 E -96.9 119.1 39.0 0.279 0.0 HOH
 3.924
 CG2
 O
THR B:19 B:19 40.0 0.286 E -96.7 118.3 40.0 0.286 0.0 HOH
 2.505
 OG1
 O
THR C:19 C:19 40.0 0.286 E -97.5 118.2 NA NA NA
THR D:19 D:19 40.0 0.286 E -96.6 118.1 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 THR A:19 A:58 36.0 0.257 E -98.5 131.4 36.0 0.257 0.0 HOH
 5.659
 CG2
 O
THR B:19 B:58 39.0 0.279 E -100.6 127.8 39.0 0.279 0.0 HOH
 3.788
 CG2
 O
THR C:19 C:58 39.0 0.279 E -97.9 128.5 NA NA NA
THR D:19 D:58 39.0 0.279 E -100.2 129.0 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 THR A:19 A:19 36.0 0.257 E -98.0 121.9 36.0 0.257 0.0 HOH
 2.590
 OG1
 O
THR B:19 B:19 36.0 0.257 E -97.6 122.0 36.0 0.257 0.0 HOH
 2.645
 OG1
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 THR A:19 A:19 39.0 0.279 E -95.0 123.9 39.0 0.279 0.0 HOH
 2.675
 OG1
 O
THR B:19 D:19 37.0 0.264 E -95.6 123.3 NA NA NA
THR C:19 C:19 38.0 0.271 E -90.9 127.0 NA NA NA
THR D:19 B:19 36.0 0.257 E -95.6 123.7 36.0 0.257 0.0 HOH
 2.646
 OG1
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 THR A:19 A:19 38.0 0.271 E -95.2 121.8 38.0 0.271 0.0 HOH
 3.579
 OG1
 O
THR B:19 B:19 38.0 0.271 E -93.7 119.8 38.0 0.271 0.0
THR C:19 C:19 36.0 0.257 E -95.8 120.2 NA NA NA
THR D:19 D:19 38.0 0.271 E -93.4 120.5 NA NA NA
THR E:19 E:19 37.0 0.264 E -93.4 121.4 NA NA NA
THR F:19 F:19 37.0 0.264 E -92.7 120.7 NA NA NA
THR G:19 G:19 35.0 0.25 E -93.3 120.0 NA NA NA
THR H:19 H:19 38.0 0.271 E -94.9 120.2 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:19 A:19 37.0 0.264 E -93.4 122.2 37.0 0.264 0.0
THR B:19 B:19 39.0 0.279 E -90.9 121.3 39.0 0.279 0.0 HOH
 4.322
 OG1
 O
THR C:19 C:19 40.0 0.286 E -98.4 119.1 NA NA NA
THR D:19 D:19 39.0 0.279 E -92.7 119.2 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:19 A:19 37.0 0.264 E -94.6 127.4 37.0 0.264 0.0 HOH
 6.784
 O
 O
THR B:19 B:19 36.0 0.257 E -94.5 118.3 36.0 0.257 0.0 HOH
 2.523
 OG1
 O
THR C:19 C:19 40.0 0.286 E -94.5 120.9 NA NA NA
THR D:19 D:19 39.0 0.279 E -96.8 120.2 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:19 A:19 38.0 0.271 E -98.1 122.1 38.0 0.271 0.0 HOH
 2.822
 OG1
 O
THR B:19 B:19 37.0 0.264 E -99.2 121.0 37.0 0.264 0.0 HOH
 2.600
 OG1
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:19 A:19 35.0 0.25 E -99.3 119.0 35.0 0.25 0.0 HOH
 2.897
 OG1
 O
THR B:19 B:19 38.0 0.271 E -100.2 117.3 38.0 0.271 0.0 HOH
 2.557
 OG1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 THR A:58 A:58 39.0 0.279 E -87.8 117.9