Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41862798 . C A CCDS3937.1:NM_000436.3:c.133Gat>Tat_NP_000427.1:p.45D>Y Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ASP A:7 A:45 82.0 0.547 -101.5 107.3 82.0 0.547 0.0 HOH
 3.443
 N
 O
ASP B:7 B:45 84.0 0.56 -111.3 117.6 84.0 0.56 0.0 HOH
 2.982
 N
 O
ASP C:7 C:45 80.0 0.533 S -112.5 117.6 NA NA NA
ASP D:7 D:45 75.0 0.5 -121.7 114.8 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ASP A:6 A:6 73.0 0.487 -114.3 129.2 73.0 0.487 0.0 HOH
 2.827
 OD1
 O
ASP B:6 B:6 71.0 0.473 -114.2 129.2 71.0 0.473 0.0 HOH
 2.906
 N
 O
ASP C:6 C:6 69.0 0.46 -115.0 129.1 NA NA NA
ASP D:6 D:6 71.0 0.473 -114.8 129.8 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ASP A:6 A:45 52.0 0.347 -117.1 120.5 52.0 0.347 0.0 HOH
 6.325
 OD1
 O
ASP B:6 B:45 53.0 0.353 -122.9 121.1 53.0 0.353 0.0 HOH
 8.846
 O
 O
ASP C:6 C:45 53.0 0.353 -125.3 122.0 NA NA NA
ASP D:6 D:45 53.0 0.353 -126.4 120.7 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ASP A:6 A:6 68.0 0.453 -124.3 120.6 68.0 0.453 0.0 HOH
 2.191
 OD2
 O
ASP B:6 B:6 65.0 0.433 -129.1 120.8 65.0 0.433 0.0 HOH
 3.045
 N
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ASP A:6 A:6 76.0 0.507 -130.6 124.9 76.0 0.507 0.0 HOH
 3.420
 CA
 O
ASP B:6 D:6 87.0 0.58 -124.8 121.7 NA NA NA
ASP C:6 C:6 71.0 0.473 -142.8 125.2 NA NA NA
ASP D:6 B:6 81.0 0.54 -102.5 114.7 81.0 0.54 0.0 HOH
 3.157
 N
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ASP A:6 A:6 75.0 0.5 -120.2 125.0 75.0 0.5 0.0 HOH
 2.633
 N
 O
ASP B:6 B:6 74.0 0.493 -120.7 124.5 74.0 0.493 0.0 HOH
 7.074
 OD1
 O
ASP C:6 C:6 74.0 0.493 -120.0 124.4 NA NA NA
ASP D:6 D:6 75.0 0.5 -120.5 124.8 NA NA NA
ASP E:6 E:6 73.0 0.487 -120.0 125.2 NA NA NA
ASP F:6 F:6 76.0 0.507 -119.9 124.7 NA NA NA
ASP G:6 G:6 76.0 0.507 -120.2 124.6 NA NA NA
ASP H:6 H:6 75.0 0.5 -120.3 125.5 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ASP A:6 A:6 65.0 0.433 -121.0 119.9 65.0 0.433 0.0 HOH
 3.707
 N
 O
ASP B:6 B:6 72.0 0.48 -103.3 126.2 72.0 0.48 0.0 HOH
 3.487
 N
 O
ASP C:6 C:6 58.0 0.387 -132.5 130.9 NA NA NA
ASP D:6 D:6 75.0 0.5 -111.2 130.5 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ASP A:6 A:6 58.0 0.387 -117.1 127.1 58.0 0.387 0.0 HOH
 2.663
 OD2
 O
ASP B:6 B:6 65.0 0.433 -124.2 116.4 65.0 0.433 0.0 HOH
 2.890
 N
 O
ASP C:6 C:6 62.0 0.413 -110.5 112.3 NA NA NA
ASP D:6 D:6 68.0 0.453 -129.4 117.1 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ASP A:6 A:6 71.0 0.473 -119.4 125.3 71.0 0.473 0.0 HOH
 3.188
 N
 O
ASP B:6 B:6 71.0 0.473 -120.2 124.6 71.0 0.473 0.0 HOH
 2.642
 OD2
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ASP A:6 A:6 58.0 0.387 -121.4 130.6 58.0 0.387 0.0 HOH
 8.171
 O
 O
ASP B:6 B:6 59.0 0.393 -124.3 128.6 59.0 0.393 0.0 HOH
 3.572
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ASP A:45 A:45 61.0 0.407 -120.6 122.8