Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 58120944 . C A CCDS3976.1:NM_138453.2:c.451Cgg>Agg_NP_612462.1:p.151R>R Homo sapiens RAB3C, member RAS oncogene family (RAB3C), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6y7g 1 Q96E17 100.0 4e-174 X-RAY
 2021-03-31 ARG A:151 A:151 52.0 0.231 -69.3 123.9 52.0 0.231 0.0 BTB
HOH
 6.766
4.145
 N
NH1
 O3
O
ARG B:151 B:151 49.0 0.218 -69.9 130.6 NA NA NA
1zbd 1 P63012 84.26 3e-125 X-RAY
 1999-04-02 ARG A:129 A:143 56.0 0.249 -64.7 126.8 56.0 0.249 0.0 HOH
 7.376
 NH1
 O
4rkf 1 P25228 85.19 2e-119 X-RAY
 2014-12-10 ARG A:144 A:142 53.0 0.236 -58.6 133.8 53.0 0.236 0.0 GNP
HOH
 9.791
2.573
 N
O
 N2
O
ARG B:144 B:142 56.0 0.249 -62.0 133.6 NA NA NA
3rab 1 P63012 89.94 2e-115 X-RAY
 1999-04-16 ARG A:126 A:143 54.0 0.24 -60.3 135.1 54.0 0.24 0.0 HOH
 3.476
 NE
 O
3dz8 1 P20337 87.86 3e-114 X-RAY
 2008-08-12 ARG A:144 A:143 53.0 0.236 -60.7 137.1 53.0 0.236 0.0 HOH
 3.428
 NH1
 O
2gf9 1 O95716 84.12 2e-107 X-RAY
 2006-05-02 ARG A:143 A:143 65.0 0.289 -55.8 131.3 65.0 0.289 0.0 HOH
 2.862
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96e17-f1 1 Q96E17 100.0 2e-174 ARG A:151 A:151 48.0 0.213 -60.7 128.5
af-p20336-f1 1 P20336 84.09 9e-142 ARG A:143 A:143 47.0 0.209 -61.1 129.2
af-p20337-f1 1 P20337 80.82 5e-137 ARG A:143 A:143 46.0 0.204 -59.8 126.2