Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 58120959 . G A CCDS3976.1:NM_138453.2:c.466Gag>Aag_NP_612462.1:p.156E>K Homo sapiens RAB3C, member RAS oncogene family (RAB3C), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6y7g 1 Q96E17 100.0 4e-174 X-RAY
 2021-03-31 GLU A:156 A:156 123.0 0.647 H -78.7 -34.2 123.0 0.647 0.0 HOH
 2.845
 OE2
 O
GLU B:156 B:156 135.0 0.711 H -75.7 -30.6 NA NA NA
1zbd 1 P63012 84.26 3e-125 X-RAY
 1999-04-02 GLU A:134 A:148 146.0 0.768 H -61.0 -29.7 146.0 0.768 0.0 HOH
 3.904
 CG
 O
4rkf 1 P25228 85.19 2e-119 X-RAY
 2014-12-10 GLU A:149 A:147 157.0 0.826 H -60.5 -37.1 157.0 0.826 0.0 HOH
 2.926
 O
 O
GLU B:149 B:147 159.0 0.837 H -55.8 -40.1 NA NA NA
3rab 1 P63012 89.94 2e-115 X-RAY
 1999-04-16 GLU A:131 A:148 158.0 0.832 H -59.6 -45.8 158.0 0.832 0.0 HOH
 3.002
 OE1
 O
3dz8 1 P20337 87.86 3e-114 X-RAY
 2008-08-12 GLU A:149 A:148 66.0 NA H -60.9 -30.5 66.0 NA NA HOH
 5.658
 N
 O
2gf9 1 O95716 84.12 2e-107 X-RAY
 2006-05-02 GLU A:148 A:148 126.0 0.663 H -60.1 -31.4 126.0 0.663 0.0 HOH
 2.680
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96e17-f1 1 Q96E17 100.0 2e-174 GLU A:156 A:156 124.0 0.653 H -64.5 -38.5
af-p20336-f1 1 P20336 84.09 9e-142 GLU A:148 A:148 129.0 0.679 H -64.4 -46.3
af-p20337-f1 1 P20337 80.82 5e-137 GLU A:148 A:148 129.0 0.679 H -64.0 -32.5