Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 58147065 . A C CCDS3976.1:NM_138453.2:c.571Atc>Ctc_NP_612462.1:p.191I>L Homo sapiens RAB3C, member RAS oncogene family (RAB3C), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6y7g 1 Q96E17 100.0 4e-174 X-RAY
 2021-03-31 ILE A:191 A:191 9.0 0.051 H -64.4 -43.1 9.0 0.051 0.0 HOH
 4.009
 CG2
 O
ILE B:191 B:191 0.0 0.0 H -60.9 -60.7 NA NA NA
1zbd 1 P63012 84.26 3e-125 X-RAY
 1999-04-02 ILE A:169 A:183 11.0 0.063 H -64.1 -41.7 1.0 0.006 0.057 B:P47709:0.057
 HOH
 6.977
 CG2
 O
4rkf 1 P25228 85.19 2e-119 X-RAY
 2014-12-10 ILE A:184 A:182 8.0 0.046 H -63.3 -50.9 8.0 0.046 0.0 HOH
 4.876
 N
 O
ILE B:184 B:182 3.0 0.017 H -65.9 -46.1 NA NA NA
3rab 1 P63012 89.94 2e-115 X-RAY
 1999-04-16 ILE A:166 A:183 12.0 0.069 H -72.8 -45.4 12.0 0.069 0.0 HOH
 3.972
 CG2
 O
3dz8 1 P20337 87.86 3e-114 X-RAY
 2008-08-12 ILE A:184 A:183 0.0 0.0 H -59.8 -53.4 0.0 0.0 0.0 HOH
 7.750
 N
 O
2gf9 1 O95716 84.12 2e-107 X-RAY
 2006-05-02 ILE A:183 A:183 3.0 0.017 H -63.9 -47.0 3.0 0.017 0.0 UNX
HOH
 5.845
2.933
 C
O
 UNK
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96e17-f1 1 Q96E17 100.0 2e-174 ILE A:191 A:191 5.0 0.029 H -64.9 -44.5
af-p20336-f1 1 P20336 84.09 9e-142 ILE A:183 A:183 4.0 0.023 H -62.7 -44.2
af-p20337-f1 1 P20337 80.82 5e-137 ILE A:183 A:183 5.0 0.029 H -67.7 -41.3