Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 64882000 . G A CCDS3985.1:NM_015342.3:c.1789Gta>Ata_NP_056157.1:p.597V>I Homo sapiens peptidylprolyl isomerase domain and WD repeat containing 1 (PPWD1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5yzg 43 Q96BP3 100.0 0.0 EM
2018-08-08 VAL AB:597 2:597 34.0 NA S -148.0 166.9 34.0 NA NA
7a5p 38 Q96BP3 100.0 0.0 EM
2020-10-14 VAL VA:597 z:597 36.0 NA S -149.9 166.1 27.0 NA NA PA:Q9ULR0:NA
2a2n 1 Q96BP3 100.0 3e-125 X-RAY
2005-07-05 VAL A:127 A:597 49.0 0.316 S -148.0 166.9 49.0 0.316 0.0 HOH
2.913
O
O
VAL B:127 B:597 48.0 0.31 S -134.3 165.7 NA NA NA
VAL C:127 C:597 48.0 0.31 S -149.8 162.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96bp3-f1 1 Q96BP3 100.0 0.0 VAL A:597 A:597 49.0 0.316 S -136.9 165.6