Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 64883155 . G A CCDS3985.1:NM_015342.3:c.1873Gtc>Atc_NP_056157.1:p.625V>I Homo sapiens peptidylprolyl isomerase domain and WD repeat containing 1 (PPWD1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5yzg 43 Q96BP3 100.0 0.0 EM
2018-08-08 VAL AB:625 2:625 56.0 NA S -67.9 154.9 56.0 NA NA
7a5p 38 Q96BP3 100.0 0.0 EM
2020-10-14 VAL VA:625 z:625 52.0 NA S -70.5 155.6 52.0 NA NA C
8.425
C
O2'
2a2n 1 Q96BP3 100.0 3e-125 X-RAY
2005-07-05 VAL A:155 A:625 38.0 0.245 S -67.9 154.9 38.0 0.245 0.0 HOH
2.545
O
O
VAL B:155 B:625 30.0 0.194 S -61.1 148.4 NA NA NA
VAL C:155 C:625 40.0 0.258 S -62.8 157.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96bp3-f1 1 Q96BP3 100.0 0.0 VAL A:625 A:625 27.0 0.174 S -62.1 148.2