Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 72184088 . G A CCDS43329.1:NM_002270.3:c.1487cGc>cAc_NP_002261.3:p.496R>H Homo sapiens transportin 1 (TNPO1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 100.0 0.0 X-RAY
 2007-10-30 ARG A:488 A:488 38.0 0.169 H -73.7 -32.7 38.0 0.169 0.0
ARG B:488 B:488 35.0 0.156 H -68.1 -35.2 NA NA NA
ARG C:488 C:488 36.0 0.16 H -70.4 -36.9 NA NA NA
ARG D:488 D:488 40.0 0.178 H -73.0 -30.7 NA NA NA
2z5j 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 ARG A:488 A:488 57.0 0.253 T -73.4 -5.4 57.0 0.253 0.0
2z5k 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 ARG A:488 A:488 44.0 0.196 H -70.2 -29.8 44.0 0.196 0.0
2z5m 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 ARG A:488 A:488 46.0 0.204 H -52.5 -44.3 46.0 0.204 0.0
2z5n 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 ARG A:488 A:488 51.0 0.227 H -68.7 -20.5 51.0 0.227 0.0
2z5o 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 ARG A:488 A:488 49.0 0.218 H -62.2 -29.8 49.0 0.218 0.0
4fq3 1 Q92973 100.0 0.0 X-RAY
 2013-08-21 ARG A:488 A:488 45.0 0.2 H -68.4 -19.3 45.0 0.2 0.0
1qbk 1 Q92973 99.89 0.0 X-RAY
 1999-06-01 ARG A:488 B:488 24.0 0.107 H -76.7 -37.2 24.0 0.107 0.0
5yvg 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 ARG A:466 A:488 74.0 0.329 H -89.2 -12.5 74.0 0.329 0.0
ARG B:466 B:488 16.0 0.071 H -89.2 -13.6 NA NA NA
5yvh 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 ARG A:466 A:488 36.0 0.16 H -74.1 -28.8 36.0 0.16 0.0
5yvi 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 ARG A:466 A:488 27.0 0.12 H -64.2 -32.6 27.0 0.12 0.0
7cyl 1 Q92973 96.63 0.0 X-RAY
 2021-02-24 ARG A:466 A:488 34.0 0.151 H -59.2 -46.8 34.0 0.151 0.0
2h4m 1 Q92973 96.4 0.0 X-RAY
 2006-10-24 ARG A:463 A:488 42.0 0.187 H -59.3 -36.3 42.0 0.187 0.0
ARG B:463 B:488 36.0 0.16 H -65.5 -33.2 36.0 0.16 0.0
5tqc 1 Q92973 96.29 0.0 X-RAY
 2017-02-15 ARG A:464 A:488 51.0 0.227 H -71.8 -16.5 51.0 0.227 0.0
2ot8 1 Q92973 95.17 0.0 X-RAY
 2007-04-10 ARG A:450 A:488 38.0 0.169 H -59.6 -34.8 38.0 0.169 0.0
ARG B:450 B:488 41.0 0.182 H -67.5 -35.8 NA NA NA
4fdd 1 Q92973 95.17 0.0 X-RAY
 2012-07-18 ARG A:450 A:488 34.0 0.151 H -74.1 -30.2 34.0 0.151 0.0 HOH
 4.055
 NH1
 O
4jlq 1 Q92973 94.94 0.0 X-RAY
 2013-04-03 ARG A:452 A:488 36.0 0.16 H -65.5 -32.0 36.0 0.16 0.0
4oo6 1 Q92973 94.94 0.0 X-RAY
 2014-02-12 ARG A:452 A:488 42.0 0.187 H -77.3 -16.0 42.0 0.187 0.0 HOH
 4.022
 NH2
 O
5j3v 1 Q92973 94.94 0.0 X-RAY
 2016-09-21 ARG A:452 A:488 44.0 0.196 H -79.3 -13.4 44.0 0.196 0.0
ARG C:452 B:488 42.0 0.187 H -84.0 -12.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q92973-f1 1 Q92973 100.0 0.0 ARG A:496 A:496 27.0 0.12 H -78.5 -29.1
af-o14787-f1 1 O14787 84.39 0.0 ARG A:485 A:485 44.0 0.196 H -87.0 -26.9