Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 72185779 . A C CCDS43329.1:NM_002270.3:c.1696Aaa>Caa_NP_002261.3:p.566K>Q Homo sapiens transportin 1 (TNPO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 100.0 0.0 X-RAY
 2007-10-30 LYS A:558 A:558 86.0 0.43 S -144.7 141.5 86.0 0.43 0.0
LYS B:558 B:558 104.0 0.52 S -140.5 143.8 NA NA NA
LYS C:558 C:558 118.0 0.59 S -141.3 140.3 NA NA NA
LYS D:558 D:558 91.0 0.455 -146.3 131.4 NA NA NA
2z5j 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 LYS A:558 A:558 94.0 0.47 -155.7 126.2 94.0 0.47 0.0
2z5k 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 LYS A:558 A:558 91.0 0.455 S -135.4 140.1 91.0 0.455 0.0 PO4
 8.589
 NZ
 O1
2z5m 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 LYS A:558 A:558 101.0 0.505 -139.0 122.0 101.0 0.505 0.0
2z5n 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 LYS A:558 A:558 116.0 0.58 S -56.2 133.7 116.0 0.58 0.0
2z5o 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 LYS A:558 A:558 99.0 0.495 -131.5 137.0 99.0 0.495 0.0
4fq3 1 Q92973 100.0 0.0 X-RAY
 2013-08-21 LYS A:558 A:558 94.0 0.47 -149.4 146.4 94.0 0.47 0.0
1qbk 1 Q92973 99.89 0.0 X-RAY
 1999-06-01 LYS A:558 B:558 98.0 0.49 S -157.4 126.0 98.0 0.49 0.0
5yvg 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 LYS A:536 A:558 125.0 0.625 -131.8 137.7 125.0 0.625 0.0
LYS B:536 B:558 114.0 0.57 -96.5 -177.3 NA NA NA
5yvh 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 LYS A:536 A:558 118.0 0.59 -136.0 135.6 118.0 0.59 0.0
5yvi 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 LYS A:536 A:558 113.0 0.565 S -142.0 138.5 113.0 0.565 0.0
7cyl 1 Q92973 96.63 0.0 X-RAY
 2021-02-24 LYS A:536 A:558 88.0 0.44 -136.8 136.0 88.0 0.44 0.0
2h4m 1 Q92973 96.4 0.0 X-RAY
 2006-10-24 LYS A:533 A:558 109.0 0.545 -148.1 135.9 109.0 0.545 0.0
LYS B:533 B:558 88.0 0.44 S -136.3 130.6 88.0 0.44 0.0
5tqc 1 Q92973 96.29 0.0 X-RAY
 2017-02-15 LYS A:534 A:558 102.0 0.51 -142.7 140.8 102.0 0.51 0.0
2ot8 1 Q92973 95.17 0.0 X-RAY
 2007-04-10 LYS A:520 A:558 89.0 0.445 -150.2 126.5 89.0 0.445 0.0
LYS B:520 B:558 94.0 0.47 S -118.1 138.9 NA NA NA
4fdd 1 Q92973 95.17 0.0 X-RAY
 2012-07-18 LYS A:520 A:558 86.0 0.43 -136.1 135.9 86.0 0.43 0.0
4jlq 1 Q92973 94.94 0.0 X-RAY
 2013-04-03 LYS A:522 A:558 83.0 0.415 -155.6 123.6 83.0 0.415 0.0
4oo6 1 Q92973 94.94 0.0 X-RAY
 2014-02-12 LYS A:522 A:558 86.0 0.43 -134.7 137.5 86.0 0.43 0.0
5j3v 1 Q92973 94.94 0.0 X-RAY
 2016-09-21 LYS A:522 A:558 86.0 0.43 -122.9 140.9 86.0 0.43 0.0
LYS C:522 B:558 93.0 0.465 -145.9 137.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q92973-f1 1 Q92973 100.0 0.0 LYS A:566 A:566 86.0 0.43 S -124.0 142.6
af-o14787-f1 1 O14787 84.39 0.0 GLN A:555 A:555 99.0 0.55 S -123.5 140.0