Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 72199560 . G A CCDS43329.1:NM_002270.3:c.2539Gtt>Att_NP_002261.3:p.847V>I Homo sapiens transportin 1 (TNPO1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 100.0 0.0 X-RAY
 2007-10-30 VAL A:839 A:839 0.0 0.0 H -70.5 -38.0 0.0 0.0 0.0
VAL B:839 B:839 2.0 0.013 I -57.3 -47.5 NA NA NA
VAL C:839 C:839 2.0 0.013 I -55.4 -48.0 NA NA NA
VAL D:839 D:839 0.0 0.0 H -72.9 -36.1 NA NA NA
2z5j 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 VAL A:839 A:839 4.0 0.026 H -69.0 -48.8 4.0 0.026 0.0
2z5k 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 VAL A:839 A:839 0.0 0.0 H -56.6 -47.3 0.0 0.0 0.0
2z5m 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 VAL A:839 A:839 0.0 0.0 H -83.0 -36.2 0.0 0.0 0.0
2z5n 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 VAL A:839 A:839 0.0 0.0 H -61.0 -45.5 0.0 0.0 0.0
2z5o 1 Q92973 100.0 0.0 X-RAY
 2007-10-23 VAL A:839 A:839 0.0 0.0 H -82.6 -27.4 0.0 0.0 0.0
4fq3 1 Q92973 100.0 0.0 X-RAY
 2013-08-21 VAL A:839 A:839 0.0 0.0 H -60.7 -23.6 0.0 0.0 0.0
1qbk 1 Q92973 99.89 0.0 X-RAY
 1999-06-01 VAL A:839 B:839 0.0 0.0 H -63.7 -43.7 0.0 0.0 0.0
5yvg 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 VAL A:817 A:839 0.0 0.0 H -67.1 -23.7 0.0 0.0 0.0
VAL B:817 B:839 1.0 0.006 H -68.1 -24.6 NA NA NA
5yvh 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 VAL A:817 A:839 4.0 0.026 H -65.9 -37.0 4.0 0.026 0.0
5yvi 1 Q92973 96.63 0.0 X-RAY
 2018-05-16 VAL A:817 A:839 0.0 0.0 H -74.8 -31.1 0.0 0.0 0.0
7cyl 1 Q92973 96.63 0.0 X-RAY
 2021-02-24 VAL A:817 A:839 0.0 0.0 H -65.6 -41.2 0.0 0.0 0.0
2h4m 1 Q92973 96.4 0.0 X-RAY
 2006-10-24 VAL A:814 A:839 0.0 0.0 H -70.2 -32.3 0.0 0.0 0.0
VAL B:814 B:839 0.0 0.0 H -71.1 -40.8 0.0 0.0 0.0
5tqc 1 Q92973 96.29 0.0 X-RAY
 2017-02-15 VAL A:815 A:839 0.0 0.0 H -71.1 -36.4 0.0 0.0 0.0
2ot8 1 Q92973 95.17 0.0 X-RAY
 2007-04-10 VAL A:801 A:839 5.0 0.032 H -88.5 -14.1 5.0 0.032 0.0
VAL B:801 B:839 0.0 0.0 H -64.6 -46.6 NA NA NA
4fdd 1 Q92973 95.17 0.0 X-RAY
 2012-07-18 VAL A:801 A:839 0.0 0.0 H -65.7 -40.7 0.0 0.0 0.0 HOH
 2.531
 CB
 O
4jlq 1 Q92973 94.94 0.0 X-RAY
 2013-04-03 VAL A:803 A:839 0.0 0.0 H -68.5 -37.1 0.0 0.0 0.0
4oo6 1 Q92973 94.94 0.0 X-RAY
 2014-02-12 VAL A:803 A:839 0.0 0.0 H -58.8 -37.8 0.0 0.0 0.0
5j3v 1 Q92973 94.94 0.0 X-RAY
 2016-09-21 VAL A:803 A:839 0.0 0.0 H -72.5 -39.9 0.0 0.0 0.0
VAL C:803 B:839 2.0 0.013 H -67.2 -32.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q92973-f1 1 Q92973 100.0 0.0 VAL A:847 A:847 0.0 0.0 H -66.2 -34.2
af-o14787-f1 1 O14787 84.39 0.0 VAL A:846 A:846 0.0 0.0 H -63.4 -41.1