Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78411602 . C A CCDS4046.1:NM_001713.2:c.46Cgt>Agt_NP_001704.2:p.16R>S Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 ARG A:16 A:16 5.0 0.022 H -60.9 -50.4 5.0 0.022 0.0 HOH
 2.450
 HH11
 O
ARG B:16 B:16 8.0 0.036 H -65.6 -48.6 8.0 0.036 0.0 HOH
 4.833
 H
 O
ARG C:16 C:16 5.0 0.022 H -64.2 -54.0 5.0 0.022 0.0 HOH
 2.612
 HH11
 O
ARG D:16 D:16 4.0 0.018 H -65.9 -52.1 4.0 0.018 0.0 HOH
 2.340
 HH21
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ARG A:16 A:16 7.0 0.031 H -58.4 -55.8 7.0 0.031 0.0 HOH
 2.161
 NH1
 O
ARG B:16 B:16 7.0 0.031 H -55.3 -56.2 7.0 0.031 0.0 HOH
 3.057
 CA
 O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ARG A:16 A:16 8.0 0.036 H -55.1 -58.9 8.0 0.036 0.0 HOH
 2.563
 N
 O
ARG B:16 B:16 13.0 0.058 H -41.9 -53.4 13.0 0.058 0.0 HOH
 2.929
 N
 O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 ARG A:16 A:16 4.0 0.018 H -46.2 -52.0 4.0 0.018 0.0 HOH
 4.645
 O
 O
ARG B:16 B:16 4.0 0.018 H -46.4 -51.3 4.0 0.018 0.0 HOH
 3.783
 NH1
 O
ARG C:16 C:16 3.0 0.013 H -46.0 -51.0 3.0 0.013 0.0 HOH
 7.221
 NH2
 O
ARG D:16 D:16 3.0 0.013 H -45.7 -52.2 3.0 0.013 0.0 HOH
 4.799
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 ARG A:16 A:16 6.0 0.027 H -63.2 -54.5