Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78411611 . G A CCDS4046.1:NM_001713.2:c.55Gct>Act_NP_001704.2:p.19A>T Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 ALA A:19 A:19 69.0 0.6 T -81.3 1.2 69.0 0.6 0.0 HOH
 2.839
 HB2
 O
ALA B:19 B:19 68.0 0.591 T -76.9 2.8 68.0 0.591 0.0 HOH
 8.224
 O
 O
ALA C:19 C:19 66.0 0.574 T -80.9 -0.2 66.0 0.574 0.0 HOH
 5.083
 C
 O
ALA D:19 D:19 63.0 0.548 T -83.1 5.7 63.0 0.548 0.0 HOH
 4.954
 C
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ALA A:19 A:19 60.0 0.522 T -80.8 17.7 60.0 0.522 0.0 HOH
 2.926
 O
 O
ALA B:19 B:19 67.0 0.583 T -84.1 10.7 67.0 0.583 0.0 HOH
 2.741
 CB
 O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ALA A:19 A:19 48.0 0.417 T -76.6 17.3 48.0 0.417 0.0 HOH
 2.677
 O
 O
ALA B:19 B:19 69.0 0.6 T -68.0 0.4 69.0 0.6 0.0 HOH
 2.970
 CB
 O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 ALA A:19 A:19 70.0 0.609 T -79.9 0.8 70.0 0.609 0.0 HOH
 5.644
 C
 O
ALA B:19 B:19 70.0 0.609 T -80.4 1.0 70.0 0.609 0.0 HOH
 6.068
 C
 O
ALA C:19 C:19 70.0 0.609 T -81.0 1.4 70.0 0.609 0.0 HOH
 4.624
 N
 O
ALA D:19 D:19 70.0 0.609 T -80.5 0.5 70.0 0.609 0.0 HOH
 3.437
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 ALA A:19 A:19 70.0 0.609 T -77.4 0.6