Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78416251 . G A CCDS4046.1:NM_001713.2:c.364Gtg>Atg_NP_001704.2:p.122V>M Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 VAL A:122 A:122 1.0 0.006 E -129.1 141.8 1.0 0.006 0.0 HCS
HOH
 7.823
3.627
 O
N
 HB3
O
VAL B:122 B:122 6.0 0.039 E -131.3 150.7 6.0 0.039 0.0 HCS
HOH
 7.862
5.056
 O
N
 HB3
O
VAL C:122 C:122 3.0 0.019 E -125.8 149.7 3.0 0.019 0.0 HCS
HOH
 7.546
3.672
 O
HB
 HB3
O
VAL D:122 D:122 1.0 0.006 E -127.7 150.3 1.0 0.006 0.0 HCS
HOH
 7.951
3.789
 O
HA
 HB3
O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 VAL A:122 A:122 3.0 0.019 E -130.0 134.6 3.0 0.019 0.0 HOH
 5.850
 CG2
 O
VAL B:122 B:122 3.0 0.019 E -132.8 139.1 3.0 0.019 0.0 HOH
 3.257
 CA
 O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 VAL A:122 A:122 1.0 0.006 E -135.1 147.1 1.0 0.006 0.0 CBH
HOH
 7.985
2.751
 O
C
 N15
O
VAL B:122 B:122 1.0 0.006 E -133.2 137.1 1.0 0.006 0.0 CBH
HOH
 8.164
3.043
 N
CA
 N15
O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 VAL A:122 A:122 4.0 0.026 E -141.8 151.3 4.0 0.026 0.0 HOH
 5.002
 CA
 O
VAL B:122 B:122 5.0 0.032 E -142.9 151.1 5.0 0.032 0.0 BME
HOH
 9.241
5.208
 C
N
 O1
O
VAL C:122 C:122 4.0 0.026 E -144.4 151.6 4.0 0.026 0.0 HOH
 6.196
 CG1
 O
VAL D:122 D:122 3.0 0.019 E -143.0 151.4 3.0 0.019 0.0 HOH
 2.720
 CG2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 VAL A:122 A:122 1.0 0.006 E -111.7 156.0