Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78417152 . C A CCDS4046.1:NM_001713.2:c.589Ccc>Acc_NP_001704.2:p.197P>T Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 PRO A:197 A:197 59.0 0.407 -76.9 168.1 59.0 0.407 0.0 HOH
 2.501
 HG2
 O
PRO B:197 B:197 74.0 0.51 -67.4 160.2 74.0 0.51 0.0 HOH
 2.879
 HB2
 O
PRO C:197 C:197 74.0 0.51 -77.1 161.4 74.0 0.51 0.0 HOH
 2.552
 HG2
 O
PRO D:197 D:197 65.0 0.448 -67.3 155.0 65.0 0.448 0.0 HOH
 2.963
 HB2
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 PRO A:197 A:197 61.0 0.421 -69.0 161.9 61.0 0.421 0.0 HOH
 3.669
 CB
 O
PRO B:197 B:197 60.0 0.414 -66.5 152.1 60.0 0.414 0.0 HOH
 3.950
 CB
 O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 PRO A:197 A:197 52.0 0.359 -60.1 158.7 52.0 0.359 0.0 HOH
 3.216
 CG
 O
PRO B:197 B:197 62.0 0.428 -58.5 151.5 62.0 0.428 0.0 HOH
 3.462
 CB
 O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 SER A:197 A:197 57.0 0.496 -58.5 160.6 57.0 0.496 0.0 HOH
 3.662
 OG
 O
SER B:197 B:197 56.0 0.487 -69.8 159.9 56.0 0.487 0.0 HOH
 3.413
 OG
 O
SER C:197 C:197 59.0 0.513 -60.5 158.7 59.0 0.513 0.0 HOH
 4.889
 OG
 O
SER D:197 D:197 56.0 0.487 -35.6 158.0 56.0 0.487 0.0 HOH
 2.661
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 PRO A:197 A:197 63.0 0.434 -69.0 152.9