Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78423725 . G A CCDS4046.1:NM_001713.2:c.956gGc>gAc_NP_001704.2:p.319G>D Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 GLY A:319 A:319 69.0 0.92 T 84.2 5.1 36.0 0.48 0.44 D:Q93088:0.44
 HOH
 3.648
 HA3
 O
GLY B:319 B:319 68.0 0.907 T 101.7 -1.0 59.0 0.787 0.12 C:Q93088:0.12
 HOH
 4.506
 HA3
 O
GLY C:319 C:319 67.0 0.893 T 95.2 1.8 52.0 0.693 0.2 B:Q93088:0.2
 HOH
 4.873
 O
 O
GLY D:319 D:319 65.0 0.867 T 88.0 9.4 49.0 0.653 0.214 A:Q93088:0.213
 HOH
 5.705
 H
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 GLY A:319 A:319 63.0 0.84 S 112.3 -5.2 63.0 0.84 0.0 HOH
 4.669
 N
 O
GLY B:319 B:319 66.0 0.88 T 83.7 13.6 66.0 0.88 0.0 HOH
 5.855
 N
 O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 GLY A:319 A:319 66.0 0.88 S 130.7 -10.1 66.0 0.88 0.0 HOH
 3.058
 CA
 O
GLY B:319 B:319 62.0 0.827 T 78.5 14.7 62.0 0.827 0.0 HOH
 3.422
 C
 O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 GLY A:319 A:319 68.0 0.907 T 90.5 0.6 57.0 0.76 0.147 C:O09171:0.147
 HOH
 8.553
 N
 O
GLY B:319 B:319 67.0 0.893 T 91.3 0.8 57.0 0.76 0.133 D:O09171:0.133
 HOH
 4.094
 CA
 O
GLY C:319 C:319 70.0 0.933 T 90.0 0.5 60.0 0.8 0.133 A:O09171:0.133
 HOH
 5.876
 N
 O
GLY D:319 D:319 70.0 0.933 T 91.1 0.5 55.0 0.733 0.2 B:O09171:0.2
 HOH
 5.877
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 GLY A:319 A:319 69.0 0.92 T 80.9 8.7