Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78423733 . C A CCDS4046.1:NM_001713.2:c.964Cca>Aca_NP_001704.2:p.322P>T Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 PRO A:322 A:322 5.0 0.034 -69.1 157.8 1.0 0.007 0.027 D:Q93088:0.028
 HOH
 3.050
 HD3
 O
PRO B:322 B:322 7.0 0.048 -79.8 162.1 7.0 0.048 0.0 HOH
 3.217
 HA
 O
PRO C:322 C:322 5.0 0.034 -71.3 158.7 2.0 0.014 0.02 B:Q93088:0.021
 HOH
 2.914
 HA
 O
PRO D:322 D:322 6.0 0.041 -71.4 158.5 6.0 0.041 0.0 HOH
 3.134
 HA
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 PRO A:322 A:322 11.0 0.076 -68.2 168.8 11.0 0.076 0.0 SM
HOH
 9.816
3.873
 O
N
 SM
O
PRO B:322 B:322 10.0 0.069 -69.3 161.0 10.0 0.069 0.0 SM
HOH
 9.790
3.686
 O
O
 SM
O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 PRO A:322 A:322 4.0 0.028 -74.4 162.6 4.0 0.028 0.0 HOH
 4.042
 CD
 O
PRO B:322 B:322 6.0 0.041 -72.4 159.7 6.0 0.041 0.0 HOH
 3.862
 CG
 O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 PRO A:322 A:322 4.0 0.028 -69.8 158.8 2.0 0.014 0.014 C:O09171:0.014
 HOH
 5.025
 CB
 O
PRO B:322 B:322 4.0 0.028 -70.3 158.2 4.0 0.028 0.0 HOH
 3.678
 O
 O
PRO C:322 C:322 4.0 0.028 -69.8 158.7 4.0 0.028 0.0 HOH
 3.526
 O
 O
PRO D:322 D:322 4.0 0.028 -69.2 158.0 4.0 0.028 0.0 HOH
 4.279
 CD
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 PRO A:322 A:322 4.0 0.028 -73.2 157.8