Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 78426800 . G A CCDS4046.1:NM_001713.2:c.1082cGg>cAg_NP_001704.2:p.361R>Q Homo sapiens betaine--homocysteine S-methyltransferase (BHMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4m3p 1 Q93088 99.75 0.0 X-RAY
 2014-06-18 ARG A:361 A:361 116.0 0.516 -125.7 75.8 14.0 0.062 0.454 B:Q93088:0.453
 HOH
 1.849
 HH21
 O
ARG B:361 B:361 114.0 0.507 -127.9 74.7 15.0 0.067 0.44 A:Q93088:0.44
 HOH
 1.938
 HH21
 O
ARG C:361 C:361 117.0 0.52 -130.2 75.4 15.0 0.067 0.453 D:Q93088:0.453
 HOH
 1.874
 HE
 O
ARG D:361 D:361 115.0 0.511 -132.2 73.8 13.0 0.058 0.453 C:Q93088:0.453
 HOH
 1.950
 HE
 O
1lt7 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ARG A:361 A:361 116.0 0.516 -128.8 70.3 11.0 0.049 0.467 B:Q93088:0.467
 SM
CIT
HOH
 9.541
4.268
2.729
 CA
CA
O
 SM
O6
O
ARG B:361 B:361 117.0 0.52 -126.0 73.2 9.0 0.04 0.48 A:Q93088:0.48
 SM
CIT
HOH
 9.651
4.982
2.707
 CA
CA
O
 SM
O3
O
1lt8 1 Q93088 98.28 0.0 X-RAY
 2002-09-11 ARG A:361 A:361 115.0 0.511 -129.3 75.0 11.0 0.049 0.462 B:Q93088:0.462
 CIT
HOH
 4.112
2.767
 CA
O
 O6
O
ARG B:361 B:361 116.0 0.516 -127.7 73.5 9.0 0.04 0.476 A:Q93088:0.476
 CIT
HOH
 4.189
2.792
 CA
O
 O6
O
1umy 1 O09171 93.09 0.0 X-RAY
 2004-05-06 ARG A:361 A:361 115.0 0.511 -128.5 75.8 14.0 0.062 0.449 B:O09171:0.449
 HOH
 2.547
 NE
 O
ARG B:361 B:361 114.0 0.507 -130.0 75.0 14.0 0.062 0.445 A:O09171:0.444
 HOH
 2.693
 NE
 O
ARG C:361 C:361 117.0 0.52 -128.6 75.8 15.0 0.067 0.453 D:O09171:0.453
 HOH
 3.001
 NE
 O
ARG D:361 D:361 116.0 0.516 -127.2 76.2 16.0 0.071 0.445 C:O09171:0.444
 HOH
 2.887
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q93088-f1 1 Q93088 100.0 0.0 ARG A:361 A:361 99.0 0.44 -121.4 89.9