Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 88100560 . A C CCDS47244.1:NM_001131005.2:c.113cTg>cGg_NP_001124477.1:p.38L>R Homo sapiens myocyte enhancer factor 2C (MEF2C), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5f28 1 Q8CFN5 97.8 5e-59 X-RAY
2016-07-13 LEU A:38 A:38 137.0 0.806 H -77.2 -22.0 110.0 0.647 0.159 B:Q8CFN5:0.159
HOH
7.836
N
O
LEU B:38 B:38 141.0 0.829 H -64.3 -41.5 110.0 0.647 0.182 A:Q8CFN5:0.182
HOH
8.558
CG
O
LEU C:38 C:38 141.0 0.829 H -79.3 -31.3 NA NA NA
LEU D:38 D:38 139.0 0.818 H -72.7 -43.9 NA NA NA
3kov 1 Q02078 96.67 1e-57 X-RAY
2010-02-16 LEU A:37 A:38 143.0 0.841 H -46.8 -42.2 3.0 0.018 0.823 B:Q02078:0.824
DA
DT
DA
DA
DA
DA
DT
DA
DG
8.816
6.474
4.225
8.184
9.189
9.272
8.517
6.457
8.941
CD1
CD1
CD1
CD2
CD1
CD1
CD1
CD1
CD1
O3'
O3'
OP1
OP2
OP1
OP1
OP1
OP2
OP2
LEU B:37 B:38 145.0 0.853 H -50.9 -42.6 3.0 0.018 0.835 A:Q02078:0.835
DA
DT
DA
DA
DA
DA
DT
DA
DG
8.618
5.608
4.243
8.345
8.604
8.480
7.805
5.404
9.094
CD1
CD1
CD1
CD2
CD1
CD1
CD1
CD1
CD2
O3'
O3'
OP1
OP2
OP1
OP1
O3'
OP1
OP1
LEU C:37 I:38 144.0 0.847 H -50.4 -42.4 NA NA NA
LEU D:37 J:38 140.0 0.824 H -49.8 -43.9 NA NA NA
3p57 1 Q02078 96.67 1e-57 X-RAY
2011-08-10 LEU A:37 A:38 139.0 0.818 H -58.0 -41.5 2.0 0.012 0.806 B:Q02078:0.806
DT
DA
DA
DT
DA
DG
HOH
9.359
9.641
9.772
7.348
5.349
8.658
3.768
CD1
CD1
CD1
CD1
CD1
CD2
CD2
OP1
OP1
O3'
O3'
OP1
OP2
O
LEU B:37 B:38 141.0 0.829 H -60.1 -39.8 1.0 0.006 0.823 A:Q02078:0.824
DA
DT
DA
DA
DA
DA
HOH
9.747
7.459
5.367
8.706
9.188
9.645
3.651
CD1
CD1
CD1
CD2
CD1
CD1
CD2
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU C:37 C:38 139.0 0.818 H -53.3 -44.8 2.0 0.012 0.806 D:Q02078:0.806
DA
DT
DA
DA
DA
DA
HOH
9.886
7.332
5.256
8.362
9.344
9.907
5.504
CD1
CD1
CD1
CD2
CD1
CD1
CD1
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU D:37 D:38 139.0 0.818 H -57.0 -39.4 1.0 0.006 0.812 C:Q02078:0.812
DT
DA
DA
DT
DA
DG
HOH
9.285
9.851
9.762
7.423
5.039
8.545
5.336
CD1
CD1
CD1
CD1
CD1
CD2
CD1
OP1
OP1
O3'
O3'
OP1
OP2
O
LEU E:37 I:38 140.0 0.824 H -54.8 -37.8 1.0 0.006 0.818 F:Q02078:0.818
DA
DT
DA
DA
DA
DA
HOH
9.806
7.541
5.071
9.571
9.378
9.852
3.735
CD1
CD1
CD1
CD2
CD1
CD1
CD2
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU F:37 J:38 140.0 0.824 H -55.9 -42.0 2.0 0.012 0.812 E:Q02078:0.812
DT
DA
DA
DT
DA
DG
HOH
9.410
9.523
9.873
7.101
4.667
8.812
4.844
CD1
CD1
CD1
CD1
CD1
CD2
N
OP1
OP1
O3'
O3'
OP1
OP2
O
6byy 1 Q02078,Q02080 89.47 3e-57 X-RAY
2018-01-31 LEU A:38 A:38 142.0 0.835 H -59.5 -41.4 1.0 0.006 0.829 B:Q02078+Q02080:0.829
DA
DT
DA
DA
DA
DA
HOH
9.671
7.349
5.124
9.035
9.126
9.878
3.448
CD1
CD1
CD1
CD2
CD1
CD1
CD2
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU B:38 B:38 144.0 0.847 H -56.8 -43.3 2.0 0.012 0.835 A:Q02078+Q02080:0.835
DT
DA
DA
DT
DA
DG
HOH
9.301
9.812
9.620
7.186
5.081
8.616
3.668
CD1
CD1
CD1
CD1
CD1
CD2
CD2
OP1
OP1
O3'
O3'
OP1
OP2
O
LEU C:38 C:38 132.0 0.776 H -59.4 -34.4 NA NA NA
LEU D:38 D:38 138.0 0.812 H -65.0 -36.9 NA NA NA
6wc2 1 Q02078,Q02080 89.47 3e-57 X-RAY
2020-07-22 LEU A:38 A:38 142.0 0.835 H -59.1 -43.7 2.0 0.012 0.823 B:Q02078+Q02080:0.824
DA
DA
DT
DA
DA
DG
HOH
9.449
9.689
9.817
7.088
4.661
9.588
3.770
CD1
CD1
CD1
CD1
CD1
CD2
CD2
C5'
OP1
O3'
O3'
OP1
OP2
O
LEU B:38 B:38 140.0 0.824 H -59.0 -43.0 1.0 0.006 0.818 A:Q02078+Q02080:0.818
DA
DT
DA
DG
DT
DT
HOH
9.908
7.376
5.352
8.603
9.533
9.874
4.733
CD1
CD1
CD1
CD2
CD1
CD1
N
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU C:38 C:38 140.0 0.824 H -60.8 -41.4 NA NA NA
LEU D:38 D:38 143.0 0.841 H -60.6 -41.9 NA NA NA
LEU I:38 I:38 143.0 0.841 H -58.5 -42.1 NA NA NA
LEU J:38 J:38 141.0 0.829 H -63.3 -39.8 NA NA NA
1tqe 3 Q02080 86.02 8e-56 X-RAY
2004-12-21 LEU E:38 P:38 138.0 0.812 H -47.4 -60.7 1.0 0.006 0.806 F:Q02080:0.806
DT
DA
DA
DT
DA
DG
9.064
9.789
9.243
7.354
5.403
8.709
CD1
CD1
CD1
CD1
CD1
CD2
OP1
OP1
O3'
OP1
OP2
OP2
LEU F:38 Q:38 137.0 0.806 H -46.7 -61.5 1.0 0.006 0.8 E:Q02080:0.8
DA
DT
DA
DA
DA
DA
9.297
7.331
5.565
8.782
9.887
9.607
CD1
CD1
CD1
CD2
CD1
CD1
O3'
OP1
OP1
OP2
OP1
OP1
LEU H:38 R:38 138.0 0.812 H -47.4 -60.4 NA NA NA
LEU I:38 S:38 139.0 0.818 H -46.3 -61.9 NA NA NA
6c9l 1 Q02080 86.02 8e-56 X-RAY
2018-02-07 LEU A:38 A:38 151.0 0.888 H -64.5 -45.7 30.0 0.176 0.712 B:Q02080:0.712
HOH
2.773
O
O
LEU B:38 B:38 146.0 0.859 H -64.8 -45.4 22.0 0.129 0.73 A:Q02080:0.729
HOH
4.763
N
O
LEU C:38 C:38 146.0 0.859 H -64.7 -45.5 NA NA NA
LEU D:38 D:38 151.0 0.888 H -64.9 -45.4 NA NA NA
LEU E:38 E:38 145.0 0.853 H -63.7 -45.9 NA NA NA
LEU F:38 F:38 145.0 0.853 H -63.6 -46.2 NA NA NA
6bz1 1 Q02078,Q02080 88.42 9e-56 X-RAY
2018-02-07 LEU A:38 C:38 141.0 0.829 H -54.1 -46.5 1.0 0.006 0.823 B:Q02078+Q02080:0.824
DT
DA
DA
DT
DA
DG
9.441
9.897
9.615
6.926
4.770
8.450
CD1
CD1
CD1
CD1
CD1
CD2
OP1
OP1
O3'
O3'
OP1
OP2
LEU B:38 D:38 142.0 0.835 H -53.7 -46.6 0.0 0.0 0.835 A:Q02078+Q02080:0.835
DA
DT
DA
DA
DA
DA
9.745
7.124
4.790
8.637
9.382
9.653
CD1
CD1
CD1
CD2
CD1
CD1
O3'
O3'
OP1
OP2
OP1
OP1
LEU E:38 A:38 141.0 0.829 H -53.3 -46.5 NA NA NA
LEU F:38 B:38 141.0 0.829 H -53.8 -46.7 NA NA NA
1n6j 3 Q02080 85.87 6e-55 X-RAY
2003-11-11 LEU C:37 A:38 144.0 0.847 H -58.5 -41.3 1.0 0.006 0.841 D:Q02080:0.841
DA
DT
DA
DA
DA
DA
HOH
9.712
7.401
5.046
8.402
9.337
9.946
4.989
CD1
CD1
CD1
CD2
CD1
CD1
N
O3'
O3'
OP1
OP2
OP1
OP1
O
LEU D:37 B:38 138.0 0.812 H -59.7 -41.8 1.0 0.006 0.806 C:Q02080:0.806
DT
DA
DA
DT
DA
DG
HOH
9.437
9.837
9.745
7.466
5.229
8.742
3.673
CD1
CD1
CD1
CD1
CD1
CD2
CD2
OP1
OP1
O3'
O3'
OP1
OP2
O
6wc5 1 Q02080 86.67 8e-54 X-RAY
2020-07-22 LEU A:37 A:38 140.0 0.824 H -61.3 -44.8 2.0 0.012 0.812 B:Q02080:0.812
DA
DA
DT
DA
DA
DG
HOH
9.411
9.957
9.843
7.465
4.991
9.887
7.553
CD1
CD1
CD1
CD1
CD1
CD2
CD1
C5'
OP1
O3'
O3'
OP1
OP2
O
LEU B:37 B:38 141.0 0.829 H -60.9 -44.8 2.0 0.012 0.817 A:Q02080:0.818
DA
DT
DA
DG
DT
DT
9.791
7.226
4.817
8.497
9.387
9.781
CD1
CD1
CD1
CD2
CD1
CD1
O3'
O3'
OP1
OP2
OP1
OP1
LEU C:37 C:38 143.0 0.841 H -61.4 -44.7 NA NA NA
LEU D:37 D:38 143.0 0.841 H -61.2 -44.5 NA NA NA
1egw 3 Q02078 98.7 9e-50 X-RAY
2000-03-20 LEU E:37 A:38 142.0 0.835 H -55.8 -41.3 2.0 0.012 0.823 F:Q02078:0.824
DA
DT
DT
DA
DG
DA
DA
DT
DA
DG
HOH
9.286
9.677
7.245
5.107
8.441
9.758
9.825
7.340
4.886
8.336
3.770
CD1
CD1
CD1
CD1
CD2
CD1
CD1
CD1
CD1
CD2
CD2
OP1
O3'
O3'
OP2
OP2
C5'
O3'
O3'
OP1
OP2
O
LEU F:37 B:38 142.0 0.835 H -58.0 -42.4 2.0 0.012 0.823 E:Q02078:0.824
DA
DT
DT
DA
DG
DA
DA
DT
DA
DG
HOH
9.831
9.816
7.134
4.891
8.267
9.388
9.698
7.486
5.468
8.296
3.589
CD1
CD1
CD1
CD1
CD2
CD1
CD1
CD1
CD1
CD2
CD2
C5'
O3'
O3'
OP2
OP2
OP1
O3'
O3'
OP1
OP2
O
LEU G:37 C:38 142.0 0.835 H -59.3 -40.2 NA NA NA
LEU H:37 D:38 139.0 0.818 H -57.5 -40.1 NA NA NA
3mu6 1 Q02078 97.18 2e-43 X-RAY
2011-11-02 LEU A:37 A:38 138.0 0.812 H -59.9 -42.5 1.0 0.006 0.806 B:Q02078:0.806
DA
DT
DA
DT
DA
DG
9.802
9.987
9.677
7.276
5.302
8.449
CD1
CD1
CD1
CD1
CD1
CD2
OP1
OP1
O3'
O3'
OP1
OP2
LEU B:37 B:38 139.0 0.818 H -60.2 -42.5 1.0 0.006 0.812 A:Q02078:0.812
DT
DT
DA
DG
DA
DA
9.688
7.330
5.239
8.425
9.724
9.839
CD1
CD1
CD1
CD2
CD1
CD1
O3'
O3'
OP1
OP2
OP1
OP1
LEU E:37 C:38 140.0 0.824 H -60.9 -41.7 NA NA NA
LEU F:37 D:38 138.0 0.812 H -59.6 -42.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06413-f1 1 Q06413 100.0 0.0 LEU A:38 A:38 145.0 0.853 H -77.6 -22.9