Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 88100573 . C A CCDS47244.1:NM_001131005.2:c.100Gag>Tag_NP_001124477.1:p.34E>* Homo sapiens myocyte enhancer factor 2C (MEF2C), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5f28 1 Q8CFN5 97.8 5e-59 X-RAY
2016-07-13 GLU A:34 A:34 51.0 0.268 H -61.0 -41.0 35.0 0.184 0.084 B:Q8CFN5:0.084
HOH
9.033
O
O
GLU B:34 B:34 81.0 0.426 H -56.8 -42.3 59.0 0.311 0.115 A:Q8CFN5:0.116
HOH
5.901
CG
O
GLU C:34 C:34 58.0 0.305 H -64.0 -36.2 NA NA NA
GLU D:34 D:34 67.0 0.353 H -57.5 -34.7 NA NA NA
3kov 1 Q02078 96.67 1e-57 X-RAY
2010-02-16 GLU A:33 A:34 65.0 0.342 H -56.4 -50.1 23.0 0.121 0.221 B:Q02078:0.221
DT
DT
DA
DT
DA
DA
DA
DA
DT
DA
8.964
6.543
5.583
5.333
7.163
8.054
4.881
3.588
6.831
7.041
OE2
OE1
OE1
OE1
OE1
OE2
OE1
OE2
OE1
OE1
O3'
O3'
OP1
OP1
OP1
O3'
O3'
OP1
OP1
OP1
GLU B:33 B:34 66.0 0.347 H -61.5 -42.8 22.0 0.116 0.231 A:Q02078:0.232
DT
DT
DA
DT
DA
DA
DA
DA
DT
DA
8.787
6.403
5.139
5.616
7.958
8.465
4.918
2.979
6.803
6.720
OE2
OE1
OE1
OE1
O
OE2
OE1
OE1
OE1
OE1
O3'
O3'
OP1
OP1
OP1
O3'
O3'
OP1
OP1
OP1
GLU C:33 I:34 64.0 0.337 H -63.8 -42.6 NA NA NA
GLU D:33 J:34 65.0 0.342 H -65.4 -41.7 NA NA NA
3p57 1 Q02078 96.67 1e-57 X-RAY
2011-08-10 GLU A:33 A:34 67.0 0.353 H -60.4 -42.6 25.0 0.132 0.221 B:Q02078:0.221
DT
DT
DA
DA
DT
DA
HOH
8.532
5.224
4.302
7.546
5.794
6.374
2.654
OE2
OE2
OE2
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
O
GLU B:33 B:34 67.0 0.353 H -54.7 -41.4 23.0 0.121 0.232 A:Q02078:0.232
DA
DT
DA
DA
DA
DA
HOH
7.690
6.083
6.397
8.465
5.151
4.152
3.020
OE1
OE1
OE1
OE2
OE2
OE2
OE1
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU C:33 C:34 66.0 0.347 H -65.2 -37.8 24.0 0.126 0.221 D:Q02078:0.221
DA
DT
DA
DA
DA
DA
HOH
7.721
6.043
6.385
8.706
5.427
4.222
2.779
OE1
OE1
OE1
OE1
OE2
OE2
OE2
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU D:33 D:34 70.0 0.368 H -60.8 -42.9 27.0 0.142 0.226 C:Q02078:0.226
DT
DT
DA
DA
DT
DA
HOH
8.267
5.298
4.616
7.454
5.686
6.615
3.024
OE2
OE2
OE2
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
O
GLU E:33 I:34 67.0 0.353 H -57.6 -39.2 22.0 0.116 0.237 F:Q02078:0.237
DA
DT
DA
DA
DA
DA
HOH
7.752
6.011
6.832
8.611
5.323
4.488
3.984
OE1
OE1
OE1
OE2
OE2
OE2
CB
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU F:33 J:34 69.0 0.363 H -63.0 -41.8 24.0 0.126 0.237 E:Q02078:0.237
DT
DT
DA
DA
DT
DA
HOH
8.466
5.122
4.092
7.635
6.084
6.891
4.131
OE2
OE1
OE1
OE1
OE1
OE1
CB
O3'
O3'
OP1
O3'
OP1
OP1
O
6byy 1 Q02078,Q02080 89.47 3e-57 X-RAY
2018-01-31 GLU A:34 A:34 62.0 0.326 H -65.1 -45.3 17.0 0.089 0.237 B:Q02078+Q02080:0.237
DA
DT
DA
DA
DA
DA
HOH
7.227
5.660
6.477
8.170
5.080
4.279
2.340
OE1
OE1
OE1
OE2
OE2
OE2
OE1
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU B:34 B:34 72.0 0.379 H -64.2 -44.0 26.0 0.137 0.242 A:Q02078+Q02080:0.242
DT
DT
DA
DA
DT
DA
HOH
8.334
5.371
4.431
7.539
5.947
6.472
2.467
OE2
OE1
OE1
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
O
GLU C:34 C:34 73.0 0.384 H -54.6 -39.8 NA NA NA
GLU D:34 D:34 83.0 0.437 H -61.0 -45.2 NA NA NA
6wc2 1 Q02078,Q02080 89.47 3e-57 X-RAY
2020-07-22 GLU A:34 A:34 70.0 0.368 H -66.6 -45.7 25.0 0.132 0.236 B:Q02078+Q02080:0.237
DA
DA
DA
DT
DA
DA
HOH
8.506
5.198
4.178
7.472
5.976
7.144
2.474
OE2
OE1
OE1
OE1
OE1
OE1
OE2
O3'
O3'
OP1
O3'
OP1
OP1
O
GLU B:34 B:34 71.0 0.374 H -64.4 -47.0 24.0 0.126 0.248 A:Q02078+Q02080:0.247
DA
DT
DA
DT
DT
DT
HOH
7.603
5.947
6.298
8.629
5.327
4.463
2.559
OE1
OE1
OE1
OE2
OE1
OE1
OE1
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU C:34 C:34 69.0 0.363 H -66.1 -46.2 NA NA NA
GLU D:34 D:34 71.0 0.374 H -64.6 -47.2 NA NA NA
GLU I:34 I:34 75.0 0.395 H -65.7 -46.4 NA NA NA
GLU J:34 J:34 68.0 0.358 H -64.5 -46.1 NA NA NA
1tqe 3 Q02080 86.02 8e-56 X-RAY
2004-12-21 GLU E:34 P:34 66.0 0.347 H -61.2 -59.1 23.0 0.121 0.226 F:Q02080:0.226
DT
DT
DA
DA
DT
DA
8.135
5.142
4.327
7.102
5.657
6.269
OE2
OE2
OE2
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
GLU F:34 Q:34 66.0 0.347 H -61.0 -59.4 24.0 0.126 0.221 E:Q02080:0.221
DA
DT
DA
DA
DA
DA
7.176
5.787
6.189
8.285
5.300
4.076
OE1
OE1
OE1
OE2
OE2
OE2
O3'
OP1
OP1
O3'
O3'
OP1
GLU H:34 R:34 67.0 0.353 H -61.4 -58.5 NA NA NA
GLU I:34 S:34 66.0 0.347 H -61.0 -58.9 NA NA NA
6c9l 1 Q02080 86.02 8e-56 X-RAY
2018-02-07 GLU A:34 A:34 67.0 0.353 H -59.2 -47.4 45.0 0.237 0.116 B:Q02080:0.116
HOH
2.716
OE1
O
GLU B:34 B:34 58.0 0.305 H -59.3 -47.7 25.0 0.132 0.173 A:Q02080:0.174
HOH
4.077
CB
O
GLU C:34 C:34 58.0 0.305 H -59.6 -47.4 NA NA NA
GLU D:34 D:34 65.0 0.342 H -59.3 -47.5 NA NA NA
GLU E:34 E:34 60.0 0.316 H -59.6 -47.3 NA NA NA
GLU F:34 F:34 66.0 0.347 H -59.4 -47.6 NA NA NA
6bz1 1 Q02078,Q02080 88.42 9e-56 X-RAY
2018-02-07 GLU A:34 C:34 69.0 0.363 H -63.8 -45.1 27.0 0.142 0.221 B:Q02078+Q02080:0.221
DT
DT
DA
DA
DT
DA
8.539
5.244
4.363
7.547
6.069
6.333
OE2
OE1
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
GLU B:34 D:34 70.0 0.368 H -64.2 -44.9 30.0 0.158 0.21 A:Q02078+Q02080:0.211
DA
DT
DA
DA
DA
DA
7.407
5.836
6.521
8.387
5.617
4.093
OE1
OE1
OE1
OE2
OE2
OE2
O3'
OP1
OP1
O3'
O3'
OP1
GLU E:34 A:34 61.0 0.321 H -63.7 -45.4 NA NA NA
GLU F:34 B:34 68.0 0.358 H -64.2 -45.1 NA NA NA
1n6j 3 Q02080 85.87 6e-55 X-RAY
2003-11-11 GLU C:33 A:34 69.0 0.363 H -57.2 -43.1 24.0 0.126 0.237 D:Q02080:0.237
DA
DT
DA
DA
DA
DA
HOH
7.432
5.936
6.426
8.246
5.427
4.518
2.712
OE1
OE1
OE1
OE2
OE2
OE2
OE1
O3'
OP1
OP1
O3'
O3'
OP1
O
GLU D:33 B:34 67.0 0.353 H -56.4 -44.1 26.0 0.137 0.216 C:Q02080:0.216
DT
DT
DA
DA
DT
DA
HOH
8.145
5.377
4.478
7.519
6.058
6.534
2.527
OE2
OE2
OE2
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
O
6wc5 1 Q02080 86.67 8e-54 X-RAY
2020-07-22 GLU A:33 A:34 60.0 0.316 H -56.4 -49.7 17.0 0.089 0.227 B:Q02080:0.226
DA
DA
DA
DT
DT
DA
DA
HOH
8.530
4.752
4.107
9.886
7.327
5.858
7.238
5.754
OE2
OE2
OE2
OE1
OE1
OE1
OE1
OE1
O3'
O3'
OP1
OP2
O3'
OP1
OP1
O
GLU B:33 B:34 68.0 0.358 H -56.3 -50.2 26.0 0.137 0.221 A:Q02080:0.221
DA
DT
DA
DT
DT
DT
DA
7.125
5.748
6.628
8.336
4.828
3.852
9.770
OE1
OE1
OE1
OE2
OE2
OE2
OE1
O3'
OP1
OP1
O3'
O3'
OP1
OP2
GLU C:33 C:34 68.0 0.358 H -57.3 -49.7 NA NA NA
GLU D:33 D:34 68.0 0.358 H -55.8 -50.7 NA NA NA
1egw 3 Q02078 98.7 9e-50 X-RAY
2000-03-20 GLU E:33 A:34 73.0 0.384 H -63.1 -38.7 27.0 0.142 0.242 F:Q02078:0.242
DT
DA
DT
DT
DA
DT
DA
DA
DT
DA
HOH
8.637
5.432
4.585
5.677
6.218
8.869
5.470
4.597
6.054
6.748
2.607
OE2
OE1
OE2
OE1
OE1
OE2
OE1
OE1
OE1
OE1
OE1
O3'
O3'
OP1
OP1
OP1
O3'
O3'
OP1
OP1
OP1
O
GLU F:33 B:34 66.0 0.347 H -63.8 -40.7 18.0 0.095 0.252 E:Q02078:0.253
DT
DA
DT
DT
DA
DT
DA
DA
DT
DA
HOH
8.937
5.510
4.589
5.971
6.154
8.658
5.349
4.498
5.693
6.564
2.610
OE2
OE1
OE1
OE1
OE1
OE2
OE1
OE2
OE1
OE1
OE1
O3'
O3'
OP1
OP1
OP1
O3'
O3'
OP1
OP1
OP1
O
GLU G:33 C:34 75.0 0.395 H -64.5 -39.4 NA NA NA
GLU H:33 D:34 73.0 0.384 H -62.8 -38.7 NA NA NA
3mu6 1 Q02078 97.18 2e-43 X-RAY
2011-11-02 GLU A:33 A:34 71.0 0.374 H -62.2 -37.9 27.0 0.142 0.232 B:Q02078:0.232
DT
DA
DT
DA
DT
DA
8.814
5.569
4.722
7.656
5.899
6.386
OE2
OE1
OE1
OE1
OE1
OE1
O3'
O3'
OP1
O3'
OP1
OP1
GLU B:33 B:34 72.0 0.379 H -61.7 -37.6 27.0 0.142 0.237 A:Q02078:0.237
DT
DT
DA
DT
DA
DA
7.617
5.947
6.381
8.781
5.567
4.528
OE1
OE1
OE1
OE2
OE1
OE1
O3'
OP1
OP1
O3'
O3'
OP1
GLU E:33 C:34 69.0 0.363 H -61.8 -38.0 NA NA NA
GLU F:33 D:34 72.0 0.379 H -62.1 -37.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06413-f1 1 Q06413 100.0 0.0 GLU A:34 A:34 54.0 0.284 H -51.9 -48.3