Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 88119587 . G A CCDS47244.1:NM_001131005.2:c.19Cag>Tag_NP_001124477.1:p.7Q>* Homo sapiens myocyte enhancer factor 2C (MEF2C), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5f28 1 Q8CFN5 97.8 5e-59 X-RAY
 2016-07-13 GLN A:7 NA:NA DO NA DO DO DO NA NA NA
GLN B:7 NA:NA DO NA DO DO DO NA NA NA
GLN C:7 NA:NA DO NA DO DO DO NA NA NA
GLN D:7 NA:NA DO NA DO DO DO NA NA NA
3kov 1 Q02078 96.67 1e-57 X-RAY
 2010-02-16 GLN A:6 A:7 143.0 0.794 -87.0 127.1 141.0 0.783 0.011 B:Q02078:0.011
 DT
DT
DT
DA
DA
DA
DA
DA
DG
 9.352
7.668
8.707
7.264
7.252
7.415
5.680
7.758
7.037
 N
NE2
N
N
N
N
N
N
N
 O3'
OP1
O3'
C5'
OP2
O3'
OP1
O3'
OP1
GLN B:6 B:7 141.0 0.783 -87.8 126.8 139.0 0.772 0.011 A:Q02078:0.011
 DT
DT
DT
DA
DA
DA
DA
DA
DG
 9.988
7.956
9.494
7.259
6.857
7.465
6.345
9.055
7.753
 N
N
N
N
N
N
NE2
N
N
 O3'
OP1
O3'
C5'
OP1
O3'
OP1
C5'
OP1
GLN C:6 I:7 143.0 0.794 -87.6 128.4 NA NA NA
GLN D:6 J:7 141.0 0.783 -87.6 129.5 NA NA NA
3p57 1 Q02078 96.67 1e-57 X-RAY
 2011-08-10 GLN A:6 A:7 137.0 0.761 -92.1 154.6 134.0 0.744 0.017 B:Q02078:0.017
 DA
DA
DA
DA
HOH
 7.705
7.518
7.872
6.577
2.850
 N
N
N
N
OE1
 O3'
OP1
O3'
OP1
O
GLN B:6 B:7 136.0 0.756 -86.0 145.2 133.0 0.739 0.017 A:Q02078:0.017
 DT
DT
DA
DG
HOH
 8.254
6.844
7.688
7.513
2.673
 N
N
N
N
NE2
 O3'
OP1
O3'
OP1
O
GLN C:6 C:7 141.0 0.783 -91.0 141.4 139.0 0.772 0.011 D:Q02078:0.011
 DT
DT
DA
DG
HOH
 8.183
6.754
7.527
7.333
7.691
 N
N
N
N
O
 O3'
OP1
O3'
OP1
O
GLN D:6 D:7 131.0 0.728 -76.3 155.2 127.0 0.706 0.022 C:Q02078:0.022
 DT
DA
DA
DA
DA
HOH
 9.999
7.516
7.133
8.005
6.680
5.718
 O
N
N
NE2
NE2
N
 O3'
O3'
OP1
O3'
OP1
O
GLN E:6 I:7 142.0 0.789 -89.2 145.3 138.0 0.767 0.022 F:Q02078:0.022
 DT
DT
DT
DA
DG
HOH
 8.283
6.705
9.695
7.483
7.630
7.532
 N
N
N
N
N
O
 O3'
OP1
O3'
C5'
OP1
O
GLN F:6 J:7 152.0 0.844 -79.2 147.1 148.0 0.822 0.022 E:Q02078:0.022
 DA
DA
DA
DA
HOH
 7.653
7.356
8.031
6.785
2.559
 N
N
N
N
O
 O3'
OP1
O3'
OP1
O
6byy 1 Q02078,Q02080 89.47 3e-57 X-RAY
 2018-01-31 GLN A:7 A:7 134.0 0.744 -77.7 149.3 132.0 0.733 0.011 B:Q02078+Q02080:0.011
 DT
DT
DA
DG
HOH
 8.214
6.835
7.526
7.515
3.327
 N
N
N
N
O
 O3'
OP1
O3'
OP1
O
GLN B:7 B:7 154.0 0.856 -66.0 142.2 151.0 0.839 0.017 A:Q02078+Q02080:0.017
 DA
DA
DA
DA
HOH
 7.885
7.377
8.139
6.824
2.254
 N
N
N
N
O
 C5'
OP1
O3'
OP1
O
GLN C:7 C:7 116.0 0.644 -90.6 136.2 NA NA NA
GLN D:7 D:7 136.0 0.756 -82.4 160.4 NA NA NA
6wc2 1 Q02078,Q02080 89.47 3e-57 X-RAY
 2020-07-22 GLN A:7 A:7 144.0 0.8 -78.3 144.5 141.0 0.783 0.017 B:Q02078+Q02080:0.017
 DA
DG
DT
DT
HOH
 7.676
7.596
8.314
6.874
5.016
 N
N
N
N
N
 O3'
OP1
O3'
OP1
O
GLN B:7 B:7 159.0 0.883 -78.0 134.8 154.0 0.856 0.027 A:Q02078+Q02080:0.028
 DA
DA
DA
DG
HOH
 7.936
6.425
8.175
8.446
2.810
 N
N
O
N
OE1
 O3'
OP1
OP1
OP1
O
GLN C:7 C:7 149.0 0.828 -78.5 141.4 NA NA NA
GLN D:7 D:7 142.0 0.789 -76.0 146.2 NA NA NA
GLN I:7 I:7 139.0 0.772 -79.0 141.3 NA NA NA
GLN J:7 J:7 135.0 0.75 -81.3 144.6 NA NA NA
1tqe 3 Q02080 86.02 8e-56 X-RAY
 2004-12-21 GLN E:7 P:7 130.0 0.722 -68.8 167.3 126.0 0.7 0.022 F:Q02080:0.022
 DA
DA
DA
DA
 7.736
7.272
7.840
6.292
 O
N
N
NE2
 C5'
OP2
O3'
OP1
GLN F:7 Q:7 129.0 0.717 -68.6 166.1 125.0 0.694 0.023 E:Q02080:0.022
 DT
DT
DA
DG
 8.285
6.481
7.650
8.256
 N
N
N
N
 O3'
OP1
O3'
OP1
GLN H:7 R:7 130.0 0.722 -68.3 167.7 NA NA NA
GLN I:7 S:7 130.0 0.722 -68.9 165.7 NA NA NA
6c9l 1 Q02080 86.02 8e-56 X-RAY
 2018-02-07 GLN A:7 A:7 255.0 1.0 360.0 18.0 255.0 1.0 0.0
GLN B:7 B:7 129.0 0.717 -85.3 112.7 129.0 0.717 0.0 HOH
 5.419
 O
 O
GLN C:7 C:7 126.0 0.7 -87.3 122.1 NA NA NA
GLN D:7 D:7 246.0 1.0 360.0 177.3 NA NA NA
GLN E:7 NA:NA DO NA DO DO DO NA NA NA
GLN F:7 NA:NA DO NA DO DO DO NA NA NA
6bz1 1 Q02078,Q02080 88.42 9e-56 X-RAY
 2018-02-07 GLN A:7 C:7 156.0 0.867 -66.8 154.8 153.0 0.85 0.017 B:Q02078+Q02080:0.017
 DT
DA
DA
DA
DA
 9.412
7.241
6.940
8.517
6.543
 O
O
N
N
N
 O3'
OP1
OP1
O3'
OP1
GLN B:7 D:7 153.0 0.85 -70.1 155.2 150.0 0.833 0.017 A:Q02078+Q02080:0.017
 DT
DT
DT
DA
DG
 8.439
6.873
9.553
7.305
7.221
 N
N
O
O
N
 O3'
OP1
O3'
OP1
OP1
GLN E:7 A:7 79.0 0.439 -67.2 155.5 NA NA NA
GLN F:7 B:7 106.0 0.589 -66.4 154.3 NA NA NA
1n6j 3 Q02080 85.87 6e-55 X-RAY
 2003-11-11 GLN C:6 A:7 133.0 0.739 -75.3 155.2 129.0 0.717 0.022 D:Q02080:0.022
 DT
DT
DA
DG
HOH
 8.229
6.597
7.486
7.350
3.012
 NE2
NE2
N
N
O
 O3'
OP1
C5'
OP1
O
GLN D:6 B:7 133.0 0.739 -75.4 154.5 130.0 0.722 0.017 C:Q02080:0.017
 DT
DA
DA
DA
DA
HOH
 9.941
7.364
6.776
8.216
6.634
2.657
 O
N
N
N
N
N
 O3'
C5'
OP1
O3'
OP1
O
6wc5 1 Q02080 86.67 8e-54 X-RAY
 2020-07-22 GLN A:6 A:7 158.0 0.878 -73.7 148.1 154.0 0.856 0.022 B:Q02080:0.022
 DA
DG
DT
DT
 7.870
7.633
8.111
6.804
 N
N
N
N
 C5'
OP1
O3'
OP1
GLN B:6 B:7 161.0 0.894 -72.1 147.4 157.0 0.872 0.022 A:Q02080:0.022
 DA
DA
DA
DG
 8.224
6.857
8.234
8.258
 N
N
O
N
 O3'
OP1
OP1
OP1
GLN C:6 C:7 146.0 0.811 -71.9 148.1 NA NA NA
GLN D:6 D:7 150.0 0.833 -71.6 147.8 NA NA NA
1egw 3 Q02078 98.7 9e-50 X-RAY
 2000-03-20 GLN E:6 A:7 141.0 0.783 -93.0 154.6 139.0 0.772 0.011 F:Q02078:0.011
 DT
DA
DT
DA
DG
DT
DA
DA
DG
HOH
 8.547
7.409
9.734
7.306
7.246
8.371
6.824
7.554
7.242
2.909
 N
N
O
N
N
N
N
N
N
O
 O3'
OP1
O3'
C5'
OP1
O3'
OP1
C5'
OP1
O
GLN F:6 B:7 141.0 0.783 -89.5 151.8 139.0 0.772 0.011 E:Q02078:0.011
 DT
DA
DT
DA
DG
DT
DA
DT
DA
DG
HOH
 8.355
6.829
9.754
7.284
7.190
8.510
7.379
9.974
7.428
7.252
2.839
 N
N
O
N
N
N
N
O
N
N
NE2
 O3'
OP1
O3'
C5'
OP1
O3'
OP1
O3'
O3'
OP1
O
GLN G:6 C:7 145.0 0.806 -88.5 150.7 NA NA NA
GLN H:6 D:7 140.0 0.778 -94.1 153.4 NA NA NA
3mu6 1 Q02078 97.18 2e-43 X-RAY
 2011-11-02 GLN A:6 A:7 152.0 0.844 -108.1 147.6 150.0 0.833 0.011 B:Q02078:0.011
 DA
DG
DT
DA
 7.425
7.252
8.317
7.183
 N
N
N
N
 O3'
OP1
O3'
OP1
GLN B:6 B:7 153.0 0.85 -108.3 147.4 151.0 0.839 0.011 A:Q02078:0.011
 DT
DA
DA
DG
 8.449
7.145
7.500
7.335
 N
N
N
N
 O3'
OP1
O3'
OP1
GLN E:6 C:7 155.0 0.861 -108.5 147.2 NA NA NA
GLN F:6 D:7 152.0 0.844 -108.8 147.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06413-f1 1 Q06413 100.0 0.0 GLN A:7 A:7 154.0 0.856 -72.4 158.3