Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 119215674 | . | G | A | CCDS47469.1:NM_014034.2:c.97Gac>Aac_NP_054753.1:p.33D>N | Homo sapiens anti-silencing function 1A histone chaperone (ASF1A), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c3i | 1 | Q9Y294 | 100.0 | 2e-129 |
X-RAY |
2015-07-29 | ASP | A:46 | A:33 | 103.0 | 0.687 | -50.8 | 147.1 | NA | NA | NA | |||||||
ASP | E:46 | E:33 | 117.0 | 0.78 | -54.4 | 143.5 | NA | NA | NA | ||||||||||||||
ASP | I:46 | I:33 | 112.0 | 0.747 | -54.6 | 146.1 | 112.0 | 0.747 | 0.0 | ||||||||||||||
ASP | M:46 | M:33 | 111.0 | 0.74 | -39.7 | 140.7 | NA | NA | NA | ||||||||||||||
ASP | Q:46 | Q:33 | 114.0 | 0.76 | -54.8 | 132.8 | NA | NA | NA | ||||||||||||||
ASP | U:46 | U:33 | 129.0 | 0.86 | -69.4 | 132.1 | NA | NA | NA | ||||||||||||||
2io5 | 1 | Q6IA08 | 100.0 | 4e-127 |
X-RAY |
2007-02-27 | ASP | A:36 | A:33 | 107.0 | 0.713 | -58.0 | 151.5 | 107.0 | 0.713 | 0.0 | |||||||
2i32 | 1 | Q9Y294 | 100.0 | 4e-116 |
X-RAY |
2006-09-19 | ASP | A:58 | A:33 | 105.0 | 0.7 | -31.2 | 120.7 | 105.0 | 0.7 | 0.0 |
HOH |
2.827 |
O |
O |
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ASP | B:58 | B:33 | 103.0 | 0.687 | -26.7 | 128.8 | NA | NA | NA | ||||||||||||||
6f0f | 1 | Q9Y294 | 100.0 | 3e-115 |
X-RAY |
2019-06-12 | ASP | A:35 | A:33 | 106.0 | 0.707 | -37.8 | 132.3 | 106.0 | 0.707 | 0.0 |
HOH |
2.904 |
N |
O |
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6f0g | 1 | Q9Y294 | 100.0 | 3e-115 |
X-RAY |
2019-06-12 | ASP | A:35 | A:33 | 104.0 | 0.693 | -75.6 | 128.9 | 104.0 | 0.693 | 0.0 |
HOH |
3.733 |
OD2 |
O |
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ASP | B:35 | B:33 | 104.0 | 0.693 | -75.2 | 128.8 | NA | NA | NA | ||||||||||||||
6f0h | 1 | Q9Y294 | 100.0 | 3e-115 |
X-RAY |
2019-06-12 | ASP | A:35 | A:33 | 111.0 | 0.74 | -63.5 | 128.5 | 111.0 | 0.74 | 0.0 |
HOH |
3.107 |
O |
O |
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ASP | C:35 | C:33 | 112.0 | 0.747 | -41.2 | 137.8 | 112.0 | 0.747 | 0.0 |
HOH |
4.409 |
O |
O |
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6zuf | 1 | Q9Y294 | 100.0 | 3e-115 |
X-RAY |
2021-06-09 | ASP | A:35 | A:33 | 121.0 | 0.807 | -63.9 | 132.0 | 121.0 | 0.807 | 0.0 |
HOH |
3.451 |
CB |
O |
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ASP | B:35 | B:33 | 126.0 | 0.84 | -64.6 | 133.0 | NA | NA | NA | ||||||||||||||
7v6q | 1 | Q9Y294 | 100.0 | 3e-115 |
X-RAY |
2021-12-29 | ASP | A:33 | A:33 | 104.0 | 0.693 | -68.7 | 136.0 | 104.0 | 0.693 | 0.0 | |||||||
ASP | E:33 | E:33 | 105.0 | 0.7 | -70.5 | 134.3 | NA | NA | NA | ||||||||||||||
3aad | 2 | Q9Y294 | 100.0 | 2e-114 |
X-RAY |
2010-04-28 | ASP | B:36 | B:33 | 103.0 | 0.687 | -55.1 | -167.7 | 103.0 | 0.687 | 0.0 | |||||||
ASP | C:36 | D:33 | 119.0 | 0.793 | -59.9 | 142.4 | 119.0 | 0.793 | 0.0 | ||||||||||||||
5bnx | 4 | Q9NVP2 | 82.91 | 1e-97 |
X-RAY |
2015-06-17 | ALA | D:33 | D:33 | 71.0 | 0.617 | -51.6 | 139.1 | 71.0 | 0.617 | 0.0 |
HOH |
3.944 |
O |
O |
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5bo0 | 4 | Q9NVP2 | 82.91 | 1e-97 |
X-RAY |
2015-06-17 | ALA | D:33 | D:33 | 64.0 | 0.557 | -52.8 | 133.9 | 64.0 | 0.557 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9y294-f1 | 1 | Q9Y294 | 100.0 | 2e-153 | ASP | A:33 | A:33 | 114.0 | 0.76 | -65.8 | 129.7 |