Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 32487398 | . | C | A | CCDS4751.1:NM_002125.3:c.401aGg>aTg_NP_002116.2:p.134R>M | Homo sapiens major histocompatibility complex, class II, DR beta 5 (HLA-DRB5), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zgl | 2 | Q29787 | 100.0 | 2e-145 |
X-RAY |
2005-10-18 | ARG | B:105 | B:105 | 125.0 | NA | 360.0 | -130.8 | 111.0 | NA | NA |
A:P01903:NA |
||||||
ARG | G:105 | E:105 | 140.0 | NA | 360.0 | 24.9 | NA | NA | NA | ||||||||||||||
ARG | L:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
ARG | Q:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1fv1 | 2 | Q30154 | 100.0 | 6e-144 |
X-RAY |
2000-09-27 | ARG | B:105 | B:105 | 219.0 | 0.973 | S | -78.3 | -5.5 | 124.0 | 0.551 | 0.422 |
A:P01903:0.422 |
HOH |
2.652 |
O |
O |
|
ARG | E:105 | E:105 | 227.0 | 1.0 | S | -77.1 | 2.3 | NA | NA | NA | |||||||||||||
1h15 | 2 | Q30126 | 100.0 | 6e-144 |
X-RAY |
2002-10-03 | ARG | B:105 | B:105 | 134.0 | 0.596 | 47.9 | 109.6 | 134.0 | 0.596 | 0.0 | |||||||
ARG | E:105 | E:105 | 166.0 | 0.738 | S | 34.4 | 52.9 | NA | NA | NA | |||||||||||||
1hqr | 2 | Q29703 | 100.0 | 6e-144 |
X-RAY |
2001-01-03 | ARG | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3pdo | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | LYS | B:106 | B:105 | 104.0 | 0.52 | -131.9 | 143.3 | 42.0 | 0.21 | 0.31 |
A:P01903:0.31 |
HOH |
6.206 |
O |
O |
||
3pgc | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | LYS | B:106 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | E:106 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3pgd | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | LYS | B:106 | B:105 | 66.0 | NA | -130.3 | 165.5 | 66.0 | NA | NA |
HOH |
3.291 |
CB |
O |
|||
LYS | E:106 | E:105 | 64.0 | NA | -129.0 | 166.8 | NA | NA | NA | ||||||||||||||
4aen | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2012-08-01 | LYS | B:106 | B:105 | 147.0 | NA | -67.2 | 360.0 | 147.0 | NA | NA | |||||||
4x5w | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2016-03-09 | LYS | B:106 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1aqd | 2 | P04229 | 91.92 | 7e-136 |
X-RAY |
1998-01-28 | LYS | B:105 | B:105 | 129.0 | 0.645 | S | -125.0 | 154.2 | 129.0 | 0.645 | 0.0 |
HOH |
4.498 |
NZ |
O |
||
LYS | E:105 | E:105 | 96.0 | 0.48 | S | -141.8 | -162.2 | NA | NA | NA | |||||||||||||
LYS | H:105 | H:105 | 91.0 | 0.455 | S | -143.3 | 164.6 | NA | NA | NA | |||||||||||||
LYS | K:105 | K:105 | 63.0 | 0.315 | S | -96.7 | 165.9 | NA | NA | NA | |||||||||||||
4ah2 | 2 | P04233,P04229 | 91.88 | 1e-135 |
X-RAY |
2012-08-01 | LYS | B:136 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4x5x | 2 | P04229 | 91.37 | 2e-134 |
X-RAY |
2016-03-09 | LYS | B:136 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | D:136 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4fqx | 5 | P04229 | 88.12 | 2e-132 |
X-RAY |
2013-01-09 | LYS | E:111 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4gbx | 4 | P04229 | 88.12 | 2e-132 |
X-RAY |
2013-01-16 | LYS | D:111 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4i5b | 2 | P04229 | 91.67 | 5e-132 |
X-RAY |
2013-12-04 | LYS | B:104 | B:105 | 95.0 | 0.475 | S | -141.7 | 161.1 | 95.0 | 0.475 | 0.0 | ||||||
LYS | E:104 | E:105 | 91.0 | 0.455 | S | -139.9 | 153.7 | NA | NA | NA | |||||||||||||
3l6f | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2010-05-12 | LYS | B:106 | B:105 | 185.0 | 0.925 | S | -70.3 | -7.9 | 147.0 | 0.735 | 0.19 |
A:P01903:0.19 |
HOH |
4.518 |
NZ |
O |
|
3s4s | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2011-09-21 | LYS | B:106 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | F:106 | E:105 | 121.0 | NA | 83.6 | 360.0 | NA | NA | NA | ||||||||||||||
3s5l | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2011-09-21 | LYS | C:106 | B:105 | 92.0 | NA | S | -64.5 | -13.2 | 91.0 | NA | NA |
G:P01730:NA |
|||||
LYS | D:106 | E:105 | 87.0 | NA | S | -59.8 | -15.7 | NA | NA | NA | |||||||||||||
1fyt | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2000-11-08 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1seb | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
1996-06-20 | LYS | B:105 | B:105 | 65.0 | 0.325 | S | -129.3 | 98.6 | 40.0 | 0.2 | 0.125 |
E:P01903:0.125 |
|||||
LYS | F:105 | F:105 | 65.0 | 0.325 | S | -129.2 | 98.6 | 39.0 | 0.195 | 0.13 |
A:P01903:0.13 |
||||||||||||
6hby | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2019-08-14 | LYS | B:106 | B:105 | 78.0 | 0.39 | -136.8 | 138.2 | 78.0 | 0.39 | 0.0 |
EDO HOH |
6.034 2.993 |
CE NZ |
O2 O |
|||
LYS | E:106 | E:105 | 78.0 | 0.39 | -137.8 | 140.7 | NA | NA | NA | ||||||||||||||
6qza | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | LYS | B:106 | BBB:105 | 61.0 | NA | -121.5 | 178.9 | 61.0 | NA | NA | |||||||
LYS | E:106 | EEE:105 | 151.0 | NA | -99.1 | 360.0 | NA | NA | NA | ||||||||||||||
6qzc | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | LYS | B:106 | BBB:105 | 206.0 | 1.0 | S | -64.0 | -15.4 | 99.0 | 0.495 | 0.505 |
A:P01903:0.535 |
HOH |
3.155 |
N |
O |
|
6qzd | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | LYS | B:106 | BBB:105 | 82.0 | 0.41 | -133.6 | 128.7 | 69.0 | 0.345 | 0.065 |
A:P01903:0.065 |
PEG EDO |
9.648 6.006 |
N CE |
C1 O1 |
||
LYS | E:106 | EEE:105 | 93.0 | 0.465 | -132.7 | 130.2 | NA | NA | NA | ||||||||||||||
6r0e | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | LYS | B:106 | BBB:105 | 148.0 | 0.74 | S | -140.0 | 132.4 | 148.0 | 0.74 | 0.0 | ||||||
5v4n | 2 | P04229 | 91.62 | 8e-131 |
X-RAY |
2017-05-03 | LYS | B:131 | C:354 | 104.0 | 0.52 | -119.2 | 122.4 | 73.0 | 0.365 | 0.155 |
A:P01903:0.155 |
||||||
LYS | D:131 | F:354 | 50.0 | NA | -121.0 | 124.4 | NA | NA | NA | ||||||||||||||
1hxy | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2001-06-27 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1jwm | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | LYS | B:105 | B:105 | 158.0 | 0.79 | S | -92.0 | 44.8 | 116.0 | 0.58 | 0.21 |
A:P01903:0.21 |
|||||
1jws | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | LYS | B:105 | B:105 | 157.0 | 0.785 | S | -94.1 | 39.3 | 117.0 | 0.585 | 0.2 |
A:P01903:0.2 |
HOH |
7.101 |
C |
O |
|
1jwu | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | LYS | B:105 | B:105 | 171.0 | 0.855 | S | -88.4 | 56.2 | 110.0 | 0.55 | 0.305 |
A:P01903:0.305 |
HOH |
8.860 |
CD |
O |
|
1klg | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-08-02 | LYS | B:105 | B:105 | 165.0 | 0.825 | S | -91.2 | 62.3 | 165.0 | 0.825 | 0.0 |
HOH |
4.248 |
CA |
O |
||
1klu | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-08-02 | LYS | B:105 | B:105 | 163.0 | 0.815 | S | -94.9 | 22.6 | 122.0 | 0.61 | 0.205 |
A:P01903:0.205 |
HOH |
2.675 |
NZ |
O |
|
1lo5 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-12-18 | LYS | B:105 | B:105 | 154.0 | 0.77 | S | 87.4 | 67.1 | 152.0 | 0.76 | 0.01 |
A:P01903:0.01 |
|||||
1pyw | 2 | P13758 | 92.11 | 1e-130 |
X-RAY |
2003-12-09 | LYS | B:105 | B:105 | 155.0 | 0.775 | S | -74.7 | -26.1 | 112.0 | 0.56 | 0.215 |
A:P01903:0.215 |
HOH |
5.170 |
CG |
O |
|
1r5i | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-03-16 | LYS | B:105 | B:105 | 106.0 | 0.53 | -96.0 | 133.9 | 106.0 | 0.53 | 0.0 |
HOH |
4.311 |
CG |
O |
|||
LYS | F:105 | F:105 | 96.0 | 0.48 | -95.9 | 132.6 | NA | NA | NA | ||||||||||||||
1sje | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | LYS | B:105 | B:105 | 164.0 | 0.82 | S | -73.0 | -7.7 | 113.0 | 0.565 | 0.255 |
A:P01903:0.245 D:P0A0L5:0.025 |
HOH |
6.997 |
CG |
O |
|
1sjh | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | LYS | B:105 | B:105 | 159.0 | 0.795 | S | -77.2 | -8.2 | 130.0 | 0.65 | 0.145 |
A:P01903:0.145 |
HOH |
8.950 |
NZ |
O |
|
1t5w | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | LYS | B:105 | B:105 | 117.0 | 0.585 | S | 66.5 | 132.1 | 117.0 | 0.585 | 0.0 |
HOH |
9.617 |
NZ |
O |
||
LYS | E:105 | E:105 | 116.0 | 0.58 | S | 65.3 | 131.7 | NA | NA | NA | |||||||||||||
1t5x | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | LYS | B:105 | B:105 | 161.0 | 0.805 | S | -75.9 | -11.2 | 116.0 | 0.58 | 0.225 |
A:P01903:0.225 |
HOH |
4.863 |
CG |
O |
|
2g9h | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2006-07-11 | LYS | B:105 | B:105 | 219.0 | 1.0 | S | -67.0 | -24.9 | 178.0 | 0.89 | 0.11 |
A:P01903:0.205 |
EPE HOH |
3.845 2.731 |
CE O |
O3S O |
|
2iam | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-04-03 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
2ian | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-04-03 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | G:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
LYS | L:105 | L:105 | 142.0 | 0.71 | S | -123.2 | 145.6 | NA | NA | NA | |||||||||||||
LYS | Q:105 | Q:105 | 151.0 | 0.755 | S | -141.8 | 153.1 | NA | NA | NA | |||||||||||||
2icw | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-03-20 | LYS | B:105 | B:105 | 197.0 | 0.985 | -87.7 | 141.0 | 178.0 | 0.89 | 0.095 |
A:P01903:0.095 |
||||||
LYS | E:105 | E:105 | 192.0 | 0.96 | -83.7 | 130.8 | NA | NA | NA | ||||||||||||||
2ipk | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-03-13 | LYS | B:105 | B:105 | 209.0 | 1.0 | S | -63.5 | -8.6 | 163.0 | 0.815 | 0.185 |
A:P01903:0.23 |
HOH |
3.677 |
NZ |
O |
|
2oje | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-01-23 | LYS | B:105 | B:105 | 88.0 | 0.44 | -107.0 | 128.9 | 88.0 | 0.44 | 0.0 |
HOH |
4.568 |
CG |
O |
|||
LYS | F:105 | F:105 | 95.0 | 0.475 | -106.2 | 127.5 | NA | NA | NA | ||||||||||||||
2xn9 | 5 | P04229 | 92.11 | 1e-130 |
X-RAY |
2010-11-24 | LYS | E:105 | E:105 | 188.0 | 0.94 | S | -112.4 | 43.6 | 139.0 | 0.695 | 0.245 |
D:P01903:0.245 |
|||||
3qxa | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2011-11-16 | LYS | B:105 | B:105 | 90.0 | 0.45 | S | -116.5 | 156.3 | 90.0 | 0.45 | 0.0 |
HOH |
6.311 |
O |
O |
||
LYS | D:105 | E:105 | 122.0 | 0.61 | S | -107.7 | 161.3 | NA | NA | NA | |||||||||||||
3qxd | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2011-11-16 | LYS | B:105 | B:105 | 122.0 | 0.61 | S | -153.9 | 165.9 | 122.0 | 0.61 | 0.0 |
HOH |
3.710 |
CG |
O |
||
LYS | D:105 | E:105 | 109.0 | 0.545 | S | 54.0 | 178.9 | NA | NA | NA | |||||||||||||
4c56 | 5 | A9JJF6 | 92.11 | 1e-130 |
X-RAY |
2014-07-23 | LYS | E:105 | E:105 | 124.0 | NA | -142.2 | 360.0 | NA | NA | NA | |||||||
LYS | K:105 | K:105 | 147.0 | 0.735 | S | -139.7 | 153.0 | 147.0 | 0.735 | 0.0 | |||||||||||||
4e41 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2012-08-29 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | G:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4ov5 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2014-07-16 | LYS | B:105 | B:105 | 127.0 | 0.635 | S | -107.4 | 130.3 | 127.0 | 0.635 | 0.0 |
HOH |
3.253 |
CA |
O |
||
LYS | D:105 | E:105 | 47.0 | NA | S | -147.0 | 168.7 | NA | NA | NA | |||||||||||||
LYS | F:105 | H:105 | 123.0 | 0.615 | S | -123.7 | 157.9 | NA | NA | NA | |||||||||||||
LYS | H:105 | K:105 | 131.0 | 0.655 | S | -134.6 | 178.1 | NA | NA | NA | |||||||||||||
LYS | J:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
LYS | L:105 | Q:105 | 117.0 | 0.585 | S | -124.5 | 136.2 | NA | NA | NA | |||||||||||||
6cqr | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 93.0 | NA | S | -143.5 | 137.6 | 93.0 | NA | NA |
HOH |
4.861 |
CG |
O |
||
LYS | G:105 | G:105 | 114.0 | NA | S | -126.9 | 148.9 | NA | NA | NA | |||||||||||||
2wbj | 2 | P01911 | 88.44 | 1e-130 |
X-RAY |
2009-04-07 | LYS | B:105 | B:105 | 110.0 | 0.55 | -119.6 | -63.6 | 110.0 | 0.55 | 0.0 | |||||||
LYS | F:105 | F:105 | 87.0 | 0.435 | -126.5 | 169.8 | NA | NA | NA | ||||||||||||||
1ymm | 2 | Q29790 | 88.89 | 2e-130 |
X-RAY |
2005-05-03 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6cqj | 2 | P04229 | 92.06 | 6e-130 |
X-RAY |
2018-06-06 | LYS | B:104 | B:105 | 173.0 | 0.865 | -75.0 | 360.0 | 173.0 | 0.865 | 0.0 |
HOH |
2.708 |
O |
O |
|||
LYS | E:104 | E:105 | 169.0 | 0.845 | -71.7 | 360.0 | NA | NA | NA | ||||||||||||||
LYS | H:104 | H:105 | 180.0 | 0.9 | -122.1 | 360.0 | NA | NA | NA | ||||||||||||||
1dlh | 2 | P13758 | 92.02 | 5e-129 |
X-RAY |
1994-06-22 | LYS | B:103 | B:105 | 156.0 | 0.78 | S | 67.8 | 89.8 | 82.0 | 0.41 | 0.37 |
D:P01903:0.37 |
HOH |
2.941 |
NZ |
O |
|
LYS | E:103 | E:105 | 154.0 | 0.77 | S | 67.4 | 68.1 | 86.0 | 0.43 | 0.34 |
A:P01903:0.33 D:P01903:0.005 |
HOH |
2.269 |
NZ |
O |
||||||||
1kg0 | 2 | P04229 | 92.02 | 5e-129 |
X-RAY |
2002-03-27 | LYS | B:103 | B:105 | 129.0 | 0.645 | S | -148.7 | 127.0 | 129.0 | 0.645 | 0.0 |
HOH |
2.773 |
N |
O |
||
1d5m | 2 | P13760 | 90.1 | 6e-129 |
X-RAY |
2000-06-28 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1j8h | 2 | P13760 | 90.1 | 6e-129 |
X-RAY |
2002-03-13 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1d5x | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:105 | B:105 | 136.0 | NA | -24.5 | 360.0 | 136.0 | NA | NA | |||||||
1d5z | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
1d6e | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
2seb | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
1998-01-28 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4is6 | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2013-10-23 | LYS | B:105 | B:105 | 112.0 | NA | S | -83.4 | 50.7 | 77.0 | NA | NA |
A:P01903:NA |
|||||
5jlz | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2016-12-07 | LYS | B:105 | B:105 | 83.0 | 0.415 | S | -126.2 | 147.2 | 83.0 | 0.415 | 0.0 |
HOH |
4.999 |
CA |
O |
||
LYS | D:105 | D:105 | 47.0 | NA | S | -129.8 | 149.6 | NA | NA | NA | |||||||||||||
5lax | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2016-12-07 | LYS | B:105 | B:105 | 128.0 | 0.64 | S | -121.6 | 124.5 | 122.0 | 0.61 | 0.03 |
A:P01903:0.03 |
HOH |
3.906 |
CD |
O |
|
LYS | D:105 | D:105 | 138.0 | 0.69 | S | -141.9 | 138.1 | NA | NA | NA | |||||||||||||
5ni9 | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2018-06-13 | LYS | B:105 | B:105 | 145.0 | 0.725 | S | -134.7 | 153.0 | 145.0 | 0.725 | 0.0 |
HOH |
4.759 |
C |
O |
||
5nig | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2018-06-13 | LYS | B:105 | B:105 | 152.0 | 0.76 | S | -135.2 | 149.7 | 145.0 | 0.725 | 0.035 |
A:P01903:0.035 |
HOH |
3.478 |
CA |
O |
|
4mcy | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-11-27 | LYS | B:107 | B:105 | 102.0 | 0.51 | -127.0 | 138.5 | 102.0 | 0.51 | 0.0 |
HOH |
2.881 |
O |
O |
|||
4mcz | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 100.0 | 0.5 | -126.6 | 138.8 | 100.0 | 0.5 | 0.0 |
HOH |
2.617 |
O |
O |
|||
4md0 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 101.0 | 0.505 | -126.6 | 138.7 | 101.0 | 0.505 | 0.0 |
HOH |
5.505 |
O |
O |
|||
4md4 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 90.0 | 0.45 | -133.8 | 133.7 | 54.0 | 0.27 | 0.18 |
A:P01903:0.18 |
HOH |
2.364 |
NZ |
O |
||
4y19 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2015-09-23 | LYS | B:107 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4y1a | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2015-09-23 | LYS | B:107 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6bil | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | B:107 | B:105 | 92.0 | 0.46 | -118.4 | 140.1 | 92.0 | 0.46 | 0.0 |
HOH |
3.178 |
N |
O |
|||
6bin | 3 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | C:107 | B:105 | 99.0 | 0.495 | -132.5 | 134.6 | 99.0 | 0.495 | 0.0 |
HOH |
8.195 |
C |
O |
|||
6biv | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | B:107 | A:105 | 101.0 | 0.505 | -137.4 | 141.8 | 101.0 | 0.505 | 0.0 | |||||||
6nix | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2020-01-22 | LYS | B:107 | B:105 | 90.0 | 0.45 | -126.1 | 137.0 | 90.0 | 0.45 | 0.0 |
HOH |
9.085 |
CE |
O |
|||
6v0y | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6v13 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6v15 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6v18 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | B:105 | 114.0 | NA | -41.3 | 360.0 | 114.0 | NA | NA | |||||||
6v19 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6v1a | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:105 | B:105 | 98.0 | NA | -106.7 | 129.6 | 98.0 | NA | NA | |||||||
6bir | 2 | P79552 | 89.53 | 6e-127 |
X-RAY |
2018-01-17 | LYS | B:107 | B:105 | 55.0 | NA | -129.6 | 124.5 | 55.0 | NA | NA | |||||||
3o6f | 2 | P13760 | 89.53 | 8e-127 |
X-RAY |
2011-03-02 | LYS | B:134 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | F:134 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3t0e | 2 | P13760 | 89.53 | 8e-127 |
X-RAY |
2012-03-07 | LYS | B:134 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6bij | 2 | P13760 | 89.95 | 9e-127 |
X-RAY |
2018-01-17 | LYS | B:104 | B:105 | 93.0 | 0.465 | -133.7 | 139.2 | 93.0 | 0.465 | 0.0 |
HOH |
2.944 |
N |
O |
|||
4mdi | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 82.0 | 0.41 | -126.7 | 137.8 | 82.0 | 0.41 | 0.0 |
HOH |
2.941 |
N |
O |
|||
4mdj | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 90.0 | 0.45 | -132.4 | 136.6 | 90.0 | 0.45 | 0.0 |
HOH |
2.683 |
O |
O |
|||
6cpo | 2 | D7RIH9 | 89.47 | 1e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 87.0 | 0.435 | -130.6 | 142.3 | 87.0 | 0.435 | 0.0 |
PGE |
9.739 |
N |
C4 |
|||
LYS | E:105 | E:105 | 104.0 | 0.52 | -119.9 | 148.8 | NA | NA | NA | ||||||||||||||
6cqq | 2 | D7RIH9 | 89.47 | 1e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 160.0 | 0.8 | 70.1 | 132.2 | 160.0 | 0.8 | 0.0 |
HOH |
5.887 |
CE |
O |
|||
LYS | G:105 | G:105 | 150.0 | 0.75 | S | 161.2 | -170.4 | NA | NA | NA | |||||||||||||
4md5 | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | LYS | B:107 | B:105 | 101.0 | 0.505 | -127.3 | 138.4 | 94.0 | 0.47 | 0.035 |
A:P01903:0.035 |
HOH |
3.119 |
N |
O |
||
6bix | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | LYS | B:107 | B:105 | 91.0 | 0.455 | -138.2 | 129.9 | 91.0 | 0.455 | 0.0 |
HOH |
5.986 |
N |
O |
|||
6biy | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | LYS | B:107 | B:105 | 86.0 | 0.43 | -135.0 | 132.1 | 86.0 | 0.43 | 0.0 |
HOH |
7.667 |
C |
O |
|||
6biz | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | LYS | B:107 | B:105 | 90.0 | 0.45 | -136.0 | 130.3 | 90.0 | 0.45 | 0.0 |
HOH |
3.118 |
N |
O |
|||
6cpl | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 182.0 | 0.91 | -75.5 | 140.5 | 142.0 | 0.71 | 0.2 |
A:P01903:0.2 |
HOH |
3.255 |
N |
O |
||
6cpn | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 140.0 | 0.7 | -77.6 | 143.6 | 136.0 | 0.68 | 0.02 |
A:P01903:0.02 |
HOH |
3.173 |
N |
O |
||
6cql | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 79.0 | NA | S | -133.2 | 149.0 | 79.0 | NA | NA |
HOH |
6.049 |
O |
O |
||
6cqn | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | LYS | B:105 | B:105 | 97.0 | NA | S | -110.5 | 158.7 | 97.0 | NA | NA | ||||||
6atf | 2 | A0A0A1I7H6 | 88.48 | 2e-126 |
X-RAY |
2017-09-13 | LYS | B:107 | B:105 | 82.0 | 0.41 | -135.0 | 139.5 | 82.0 | 0.41 | 0.0 |
HOH |
2.671 |
NZ |
O |
|||
LYS | D:107 | E:105 | 80.0 | 0.4 | -134.4 | 138.4 | NA | NA | NA | ||||||||||||||
6ati | 2 | A0A0A1I7H6 | 88.48 | 2e-126 |
X-RAY |
2017-09-13 | LYS | B:107 | B:105 | 95.0 | 0.475 | -138.9 | 142.9 | 74.0 | 0.37 | 0.105 |
A:P01903:0.105 |
HOH |
2.678 |
NZ |
O |
||
LYS | D:107 | E:105 | 95.0 | 0.475 | -138.3 | 143.1 | NA | NA | NA | ||||||||||||||
5v4m | 2 | P01911 | 88.48 | 2e-125 |
X-RAY |
2017-05-03 | LYS | B:131 | F:352 | 74.0 | 0.37 | -141.4 | 139.2 | 74.0 | 0.37 | 0.0 |
HOH |
7.298 |
N |
O |
|||
LYS | D:131 | C:352 | 76.0 | 0.38 | -141.4 | 139.2 | NA | NA | NA | ||||||||||||||
LYS | F:131 | I:352 | 75.0 | 0.375 | -142.1 | 139.2 | NA | NA | NA | ||||||||||||||
LYS | H:131 | L:352 | 71.0 | 0.355 | -141.8 | 139.8 | NA | NA | NA | ||||||||||||||
1bx2 | 2 | P04229 | 88.48 | 5e-125 |
X-RAY |
1998-10-21 | LYS | B:103 | B:105 | 141.0 | 0.705 | S | 73.9 | 106.2 | 84.0 | 0.42 | 0.285 |
D:P01903:0.285 |
HOH |
4.218 |
O |
O |
|
LYS | E:103 | E:105 | 143.0 | 0.715 | S | 68.2 | 114.3 | 92.0 | 0.46 | 0.255 |
A:P01903:0.255 |
HOH |
6.410 |
NZ |
O |
||||||||
6atz | 2 | A0A0A1I7H6 | 88.83 | 7e-125 |
X-RAY |
2017-09-20 | LYS | B:103 | B:105 | 31.0 | NA | -140.4 | 136.4 | 31.0 | NA | NA | |||||||
LYS | D:103 | D:105 | 31.0 | NA | -139.7 | 135.5 | NA | NA | NA | ||||||||||||||
2q6w | 2 | P79483 | 86.84 | 7e-121 |
X-RAY |
2007-07-24 | LYS | B:105 | B:105 | 127.0 | 0.635 | S | -129.3 | 168.2 | 127.0 | 0.635 | 0.0 |
HOH |
3.010 |
O |
O |
||
LYS | E:105 | E:105 | 122.0 | 0.61 | S | -133.8 | 164.4 | NA | NA | NA | |||||||||||||
2fse | 2 | P04229 | 84.49 | 6e-120 |
X-RAY |
2006-09-19 | LYS | B:102 | B:105 | 86.0 | 0.43 | S | -74.1 | 166.2 | 86.0 | 0.43 | 0.0 | ||||||
LYS | D:102 | D:105 | 100.0 | 0.5 | S | -104.0 | 174.1 | NA | NA | NA | |||||||||||||
3c5j | 2 | Q6YJU6 | 85.79 | 2e-119 |
X-RAY |
2008-08-05 | LYS | B:105 | B:105 | 230.0 | 1.0 | -81.0 | 360.0 | 230.0 | 1.0 | 0.0 |
HOH |
2.845 |
NZ |
O |
|||
7n19 | 2 | Q5Y7D1 | 85.03 | 1e-118 |
X-RAY |
2021-08-18 | LYS | B:102 | B:105 | 73.0 | 0.365 | S | -122.7 | 147.2 | 73.0 | 0.365 | 0.0 | ||||||
LYS | E:102 | E:105 | 65.0 | 0.325 | S | -122.3 | 145.0 | NA | NA | NA | |||||||||||||
LYS | H:102 | H:105 | 132.0 | 0.66 | S | -128.7 | 152.8 | NA | NA | NA | |||||||||||||
LYS | K:102 | K:105 | 131.0 | 0.655 | S | -132.4 | 144.8 | NA | NA | NA | |||||||||||||
4h25 | 2 | B8YAC7 | 86.17 | 2e-118 |
X-RAY |
2013-10-16 | LYS | B:103 | B:105 | 93.0 | 0.465 | -117.9 | 133.1 | 93.0 | 0.465 | 0.0 |
IPA HOH |
8.406 2.898 |
N N |
C3 O |
|||
LYS | E:103 | E:105 | 175.0 | 0.875 | -110.0 | -175.5 | NA | NA | NA | ||||||||||||||
4h26 | 2 | B8YAC7 | 86.17 | 2e-118 |
X-RAY |
2013-10-16 | LYS | B:103 | B:105 | 160.0 | 0.8 | S | 72.4 | -149.9 | 160.0 | 0.8 | 0.0 |
HOH |
4.928 |
CG |
O |
||
LYS | E:103 | E:105 | 120.0 | 0.6 | 101.9 | 138.0 | NA | NA | NA | ||||||||||||||
1a6a | 2 | P01912 | 84.49 | 5e-118 |
X-RAY |
1998-05-27 | LYS | B:101 | B:105 | 121.0 | 0.605 | S | -138.3 | 138.1 | 121.0 | 0.605 | 0.0 | ||||||
4h1l | 2 | D0AB36 | 85.56 | 6e-117 |
X-RAY |
2012-11-14 | LYS | B:102 | B:105 | 257.0 | 1.0 | -115.5 | 360.0 | 257.0 | 1.0 | 0.0 | |||||||
LYS | E:102 | E:105 | 258.0 | 1.0 | -114.6 | 360.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q30154-f1 | 1 | Q30154 | 100.0 | 0.0 | ARG | A:134 | A:134 | 155.0 | 0.689 | -119.7 | 133.8 | ||
af-p01911-f1 | 1 | P01911 | 88.72 | 7e-168 | LYS | A:134 | A:134 | 129.0 | 0.645 | S | -130.8 | 141.7 | |
af-p13762-f1 | 1 | P13762 | 86.09 | 2e-162 | LYS | A:134 | A:134 | 102.0 | 0.51 | -119.0 | 137.7 | ||
af-p79483-f1 | 1 | P79483 | 86.84 | 2e-162 | LYS | A:134 | A:134 | 141.0 | 0.705 | S | -134.6 | 141.8 |