Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42974717 . T A CCDS4878.1:NM_006245.3:c.391Ttc>Atc_NP_006236.1:p.131F>I Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 PHE B:55 B:45 48.0 NA H 6.2 -99.6 NA NA NA
PHE E:55 E:45 48.0 NA H 9.3 -100.5 48.0 NA NA
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 PHE B:26 B:55 70.0 0.333 -93.2 71.7 70.0 0.333 0.0
PHE E:26 E:55 63.0 0.3 -120.3 -111.6 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 PHE B:22 B:45 34.0 0.162 S -108.3 -20.0 34.0 0.162 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 PHE B:18 B:45 46.0 NA T -47.1 -66.5 46.0 NA NA
PHE E:18 E:45 46.0 NA H -36.7 -66.6 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 PHE B:18 B:45 41.0 NA T -37.8 -72.2 41.0 NA NA
PHE E:18 E:45 41.0 NA T -41.7 -72.7 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 PHE A:27 A:55 34.0 0.162 S -101.3 1.6 34.0 0.162 0.0 HOH
 2.797
 N
 O
PHE B:27 B:55 30.0 0.143 S -108.1 1.7 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 PHE B:45 AAA:55 32.0 0.152 S -107.4 2.4 32.0 0.152 0.0 HOH
 2.777
 CD2
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 PHE A:67 A:55 36.0 0.171 -104.4 -18.4 36.0 0.171 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 PHE A:30 A:55 76.0 0.362 -121.2 101.2 76.0 0.362 0.0 HOH
 7.044
 CB
 O
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 PHE A:30 A:55 70.0 0.333 -74.3 106.6 70.0 0.333 0.0
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 PHE A:30 A:55 71.0 0.338 -109.4 88.8 71.0 0.338 0.0 HOH
 5.583
 CE2
 O
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 PHE A:30 A:55 70.0 0.333 -127.4 118.9 70.0 0.333 0.0
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 PHE A:30 NA:NA DO NA DO DO DO NA NA NA
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 PHE C:372 F:55 44.0 0.21 T -79.5 -27.8 44.0 0.21 0.0
PHE H:372 C:55 45.0 0.214 T -79.4 -27.8 45.0 0.214 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 PHE C:372 F:55 42.0 0.2 S -95.7 -24.2 42.0 0.2 0.0
PHE H:372 C:55 42.0 0.2 S -95.7 -24.2 42.0 0.2 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 PHE C:372 F:55 53.0 0.252 T -84.9 -22.5 53.0 0.252 0.0
PHE H:372 C:55 53.0 0.252 T -84.9 -22.5 53.0 0.252 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 PHE C:372 C:55 39.0 0.186 T -84.7 -27.7 39.0 0.186 0.0
PHE H:372 F:55 40.0 0.19 T -84.7 -27.7 40.0 0.19 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 PHE E:26 E:55 84.0 0.4 -126.7 45.4 84.0 0.4 0.0
PHE F:26 F:55 85.0 0.405 -126.7 45.4 85.0 0.405 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 PHE A:131 A:131 39.0 0.186 S -110.2 -0.4
af-q13362-f1 1 Q13362 81.45 0.0 PHE A:55 A:55 37.0 0.176 S -109.1 -10.1