Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 114378585 . A C CCDS34517.1:NM_153612.3:c.877Tac>Gac_NP_705840.2:p.293Y>D Homo sapiens heparan sulfate-glucosamine 3-sulfotransferase 5 (HS3ST5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7scd 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 TYR A:319 A:1293 65.0 0.283 E -85.1 146.9 65.0 0.283 0.0 SGN
A3P
 9.491
2.767
 O
O
 O6S
N6
7sce 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 TYR A:319 A:1293 57.0 0.248 E -71.4 146.8 57.0 0.248 0.0 SGN
A3P
HOH
 9.578
2.999
2.871
 O
O
N
 O4S
N6
O
3bd9 1 Q8IZT8 99.23 0.0 X-RAY
 2008-01-29 TYR A:227 A:293 49.0 0.213 E -85.1 146.7 49.0 0.213 0.0 A3P
HOH
 3.025
2.648
 O
N
 N6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8izt8-f1 1 Q8IZT8 100.0 0.0 TYR A:293 A:293 45.0 0.196 E -68.9 133.2