Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 114378704 . A C CCDS34517.1:NM_153612.3:c.758gTc>gGc_NP_705840.2:p.253V>G Homo sapiens heparan sulfate-glucosamine 3-sulfotransferase 5 (HS3ST5), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7scd 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 VAL A:279 A:1253 0.0 0.0 E -98.3 132.0 0.0 0.0 0.0 A3P
 9.393
 CG1
 C8
7sce 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 VAL A:279 A:1253 1.0 0.006 E -99.4 131.3 1.0 0.006 0.0 A3P
HOH
 9.033
3.779
 CG1
CG1
 C8
O
3bd9 1 Q8IZT8 99.23 0.0 X-RAY
 2008-01-29 VAL A:187 A:253 0.0 0.0 E -97.5 131.9 0.0 0.0 0.0 A3P
HOH
 8.974
3.787
 CG1
CA
 C8
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8izt8-f1 1 Q8IZT8 100.0 0.0 VAL A:253 A:253 0.0 0.0 E -99.3 127.2