Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 114378780 . C A CCDS34517.1:NM_153612.3:c.682Gca>Tca_NP_705840.2:p.228A>S Homo sapiens heparan sulfate-glucosamine 3-sulfotransferase 5 (HS3ST5), mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7scd 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 ALA A:254 A:1228 2.0 0.017 H -57.7 -33.5 2.0 0.017 0.0 SGN
 7.008
 N
 O6S
7sce 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 ALA A:254 A:1228 3.0 0.026 H -69.2 -27.0 3.0 0.026 0.0 SGN
HOH
 6.703
4.434
 N
CA
 O4S
O
3bd9 1 Q8IZT8 99.23 0.0 X-RAY
 2008-01-29 ALA A:162 A:228 1.0 0.009 H -57.9 -34.6 1.0 0.009 0.0 HOH
 4.285
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8izt8-f1 1 Q8IZT8 100.0 0.0 ALA A:228 A:228 0.0 0.0 H -62.6 -39.9