Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 114378789 . T A CCDS34517.1:NM_153612.3:c.673Aaa>Taa_NP_705840.2:p.225K>* Homo sapiens heparan sulfate-glucosamine 3-sulfotransferase 5 (HS3ST5), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7scd 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 LYS A:251 A:1225 77.0 NA T -82.5 -17.2 77.0 NA NA SGN
 8.920
 O
 O6S
7sce 1 P0AA25,Q8IZT8 91.47 0.0 X-RAY
 2022-01-19 LYS A:251 A:1225 100.0 NA T -81.8 -8.7 100.0 NA NA SGN
HOH
 8.653
9.470
 O
O
 O4S
O
3bd9 1 Q8IZT8 99.23 0.0 X-RAY
 2008-01-29 LYS A:159 A:225 185.0 0.925 T -82.8 -17.9 185.0 0.925 0.0 HOH
 3.945
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8izt8-f1 1 Q8IZT8 100.0 0.0 LYS A:225 A:225 166.0 0.83 T -76.4 -19.5