Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 24667501 . A C CCDS4558.1:NM_018473.3:c.10Atg>Ctg_NP_060943.1:p.4M>L Homo sapiens acyl-CoA thioesterase 13 (ACOT13), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2f0x 1 Q9NPJ3 100.0 6e-100 X-RAY
 2006-10-10 MSE A:4 A:4 74.0 0.4 H -51.8 -56.0 74.0 0.4 0.0 HOH
 3.481
 N
 O
MSE B:4 B:4 67.0 0.362 H -63.4 -42.4 67.0 0.362 0.0 HOH
 5.731
 N
 O
MSE C:4 C:4 84.0 0.454 H -66.7 -40.3 84.0 0.454 0.0 HOH
 7.290
 CE
 O
MSE D:4 D:4 107.0 0.578 360.0 -49.1 107.0 0.578 0.0 HOH
 8.058
 SE
 O
MSE E:4 E:4 106.0 0.573 360.0 -48.7 NA NA NA
MSE F:4 F:4 75.0 0.405 H -62.6 -49.5 NA NA NA
MSE G:4 G:4 62.0 0.335 H -56.6 -51.7 NA NA NA
MSE H:4 H:4 167.0 0.903 360.0 -132.3 NA NA NA
3f5o 1 Q9NPJ3 100.0 6e-100 X-RAY
 2009-08-18 MET A:4 A:4 74.0 0.4 H -65.8 -47.3 74.0 0.4 0.0 HOH
 2.815
 N
 O
MET B:4 B:4 102.0 0.551 360.0 -54.9 102.0 0.551 0.0 HOH
 3.518
 SD
 O
MET C:4 C:4 77.0 0.416 H -64.9 -22.5 77.0 0.416 0.0 UOC
HOH
 9.397
2.921
 O
N
 CCG
O
MET D:4 D:4 78.0 0.422 H -66.0 -43.1 78.0 0.422 0.0 HOH
 3.481
 CE
 O
MET E:4 E:4 68.0 0.368 H -62.7 -42.7 NA NA NA
MET F:4 F:4 55.0 0.297 H -52.9 -43.2 NA NA NA
MET G:4 G:4 108.0 0.584 360.0 -29.8 NA NA NA
MET H:4 H:4 76.0 0.411 H -57.6 -41.9 NA NA NA
2cy9 1 Q9CQR4 83.57 8e-85 X-RAY
 2006-01-06 MSE A:4 NA:NA DO NA DO DO DO NA NA NA
MSE B:4 B:4 58.0 0.314 H -77.3 -38.1 58.0 0.314 0.0 HOH
 7.179
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9npj3-f1 1 Q9NPJ3 100.0 8e-101 MET A:4 A:4 58.0 0.314 H -58.8 -47.2