Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 24667550 . A C CCDS4558.1:NM_018473.3:c.59aAt>aCt_NP_060943.1:p.20N>T Homo sapiens acyl-CoA thioesterase 13 (ACOT13), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2f0x 1 Q9NPJ3 100.0 6e-100 X-RAY
2006-10-10 ASN A:20 A:20 89.0 0.556 S -75.7 -173.3 21.0 0.131 0.425 B:Q9NPJ3:0.425
SO4
SO4
HOH
9.797
6.870
3.263
ND2
O
N
O2
O4
O
ASN B:20 B:20 98.0 0.613 S -71.1 -175.3 30.0 0.188 0.425 A:Q9NPJ3:0.425
SO4
SO4
HOH
6.966
9.598
3.510
O
ND2
N
O3
O2
O
ASN C:20 C:20 86.0 0.537 S -79.3 -176.9 29.0 0.181 0.356 D:Q9NPJ3:0.356
SO4
SO4
HOH
9.803
7.060
3.337
CG
O
N
O4
O1
O
ASN D:20 D:20 90.0 0.562 S -76.0 -165.7 27.0 0.169 0.393 C:Q9NPJ3:0.394
SO4
SO4
HOH
9.823
7.015
3.373
OD1
O
ND2
O4
O3
O
ASN E:20 E:20 94.0 0.588 S -66.4 -162.7 NA NA NA
ASN F:20 F:20 90.0 0.562 S -76.9 -169.0 NA NA NA
ASN G:20 G:20 103.0 0.644 S -60.6 -170.3 NA NA NA
ASN H:20 H:20 91.0 0.569 S -64.8 -174.6 NA NA NA
3f5o 1 Q9NPJ3 100.0 6e-100 X-RAY
2009-08-18 ASN A:20 A:20 83.0 0.519 S -75.5 -176.8 11.0 0.069 0.45 B:Q9NPJ3:0.45
UOC
HOH
8.641
3.011
ND2
ND2
CCB
O
ASN B:20 B:20 93.0 0.581 S -76.1 -173.3 27.0 0.169 0.412 A:Q9NPJ3:0.412
CL
UOC
P6G
HOH
9.042
8.104
2.848
3.105
ND2
ND2
ND2
ND2
CL
CCB
O13
O
ASN C:20 C:20 95.0 0.594 S -81.7 -167.7 30.0 0.188 0.406 D:Q9NPJ3:0.406
CL
UOC
P6G
HOH
9.089
8.570
3.134
3.044
ND2
ND2
ND2
N
CL
CCC
O13
O
ASN D:20 D:20 90.0 0.562 S -83.3 -169.8 28.0 0.175 0.387 C:Q9NPJ3:0.388
CL
UOC
HOH
9.224
8.566
2.990
OD1
ND2
N
CL
CCG
O
ASN E:20 E:20 84.0 0.525 S -76.8 -174.4 NA NA NA
ASN F:20 F:20 94.0 0.588 S -75.5 -175.5 NA NA NA
ASN G:20 G:20 96.0 0.6 S -78.8 -168.0 NA NA NA
ASN H:20 H:20 83.0 0.519 S -76.3 -173.3 NA NA NA
2h4u 1 Q9NPJ3 100.0 1e-86 X-RAY
2006-06-20 ASN A:25 A:20 101.0 0.631 -80.6 -172.3 41.0 0.256 0.375 B:Q9NPJ3:0.375
HOH
6.745
O
O
ASN B:25 B:20 101.0 0.631 -91.3 -162.9 34.0 0.212 0.419 A:Q9NPJ3:0.419
HOH
3.536
N
O
ASN C:25 C:20 99.0 0.619 -85.7 -171.8 33.0 0.206 0.413 D:Q9NPJ3:0.412
HOH
3.080
ND2
O
ASN D:25 D:20 87.0 0.544 S -88.8 -169.6 27.0 0.169 0.375 C:Q9NPJ3:0.375
HOH
3.231
N
O
2cy9 1 Q9CQR4 83.57 8e-85 X-RAY
2006-01-06 GLY A:20 A:20 28.0 0.373 -155.1 22.4 28.0 0.373 0.0
GLY B:20 B:20 93.0 1.0 360.0 171.6 93.0 1.0 0.0 HOH
3.142
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9npj3-f1 1 Q9NPJ3 100.0 8e-101 ASN A:20 A:20 96.0 0.6 S -92.8 -165.1