Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 24667550 | . | A | C | CCDS4558.1:NM_018473.3:c.59aAt>aCt_NP_060943.1:p.20N>T | Homo sapiens acyl-CoA thioesterase 13 (ACOT13), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2f0x | 1 | Q9NPJ3 | 100.0 | 6e-100 |
X-RAY |
2006-10-10 | ASN | A:20 | A:20 | 89.0 | 0.556 | S | -75.7 | -173.3 | 21.0 | 0.131 | 0.425 |
B:Q9NPJ3:0.425 |
SO4 SO4 HOH |
9.797 6.870 3.263 |
ND2 O N |
O2 O4 O |
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ASN | B:20 | B:20 | 98.0 | 0.613 | S | -71.1 | -175.3 | 30.0 | 0.188 | 0.425 |
A:Q9NPJ3:0.425 |
SO4 SO4 HOH |
6.966 9.598 3.510 |
O ND2 N |
O3 O2 O |
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ASN | C:20 | C:20 | 86.0 | 0.537 | S | -79.3 | -176.9 | 29.0 | 0.181 | 0.356 |
D:Q9NPJ3:0.356 |
SO4 SO4 HOH |
9.803 7.060 3.337 |
CG O N |
O4 O1 O |
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ASN | D:20 | D:20 | 90.0 | 0.562 | S | -76.0 | -165.7 | 27.0 | 0.169 | 0.393 |
C:Q9NPJ3:0.394 |
SO4 SO4 HOH |
9.823 7.015 3.373 |
OD1 O ND2 |
O4 O3 O |
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ASN | E:20 | E:20 | 94.0 | 0.588 | S | -66.4 | -162.7 | NA | NA | NA | |||||||||||||
ASN | F:20 | F:20 | 90.0 | 0.562 | S | -76.9 | -169.0 | NA | NA | NA | |||||||||||||
ASN | G:20 | G:20 | 103.0 | 0.644 | S | -60.6 | -170.3 | NA | NA | NA | |||||||||||||
ASN | H:20 | H:20 | 91.0 | 0.569 | S | -64.8 | -174.6 | NA | NA | NA | |||||||||||||
3f5o | 1 | Q9NPJ3 | 100.0 | 6e-100 |
X-RAY |
2009-08-18 | ASN | A:20 | A:20 | 83.0 | 0.519 | S | -75.5 | -176.8 | 11.0 | 0.069 | 0.45 |
B:Q9NPJ3:0.45 |
UOC HOH |
8.641 3.011 |
ND2 ND2 |
CCB O |
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ASN | B:20 | B:20 | 93.0 | 0.581 | S | -76.1 | -173.3 | 27.0 | 0.169 | 0.412 |
A:Q9NPJ3:0.412 |
CL UOC P6G HOH |
9.042 8.104 2.848 3.105 |
ND2 ND2 ND2 ND2 |
CL CCB O13 O |
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ASN | C:20 | C:20 | 95.0 | 0.594 | S | -81.7 | -167.7 | 30.0 | 0.188 | 0.406 |
D:Q9NPJ3:0.406 |
CL UOC P6G HOH |
9.089 8.570 3.134 3.044 |
ND2 ND2 ND2 N |
CL CCC O13 O |
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ASN | D:20 | D:20 | 90.0 | 0.562 | S | -83.3 | -169.8 | 28.0 | 0.175 | 0.387 |
C:Q9NPJ3:0.388 |
CL UOC HOH |
9.224 8.566 2.990 |
OD1 ND2 N |
CL CCG O |
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ASN | E:20 | E:20 | 84.0 | 0.525 | S | -76.8 | -174.4 | NA | NA | NA | |||||||||||||
ASN | F:20 | F:20 | 94.0 | 0.588 | S | -75.5 | -175.5 | NA | NA | NA | |||||||||||||
ASN | G:20 | G:20 | 96.0 | 0.6 | S | -78.8 | -168.0 | NA | NA | NA | |||||||||||||
ASN | H:20 | H:20 | 83.0 | 0.519 | S | -76.3 | -173.3 | NA | NA | NA | |||||||||||||
2h4u | 1 | Q9NPJ3 | 100.0 | 1e-86 |
X-RAY |
2006-06-20 | ASN | A:25 | A:20 | 101.0 | 0.631 | -80.6 | -172.3 | 41.0 | 0.256 | 0.375 |
B:Q9NPJ3:0.375 |
HOH |
6.745 |
O |
O |
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ASN | B:25 | B:20 | 101.0 | 0.631 | -91.3 | -162.9 | 34.0 | 0.212 | 0.419 |
A:Q9NPJ3:0.419 |
HOH |
3.536 |
N |
O |
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ASN | C:25 | C:20 | 99.0 | 0.619 | -85.7 | -171.8 | 33.0 | 0.206 | 0.413 |
D:Q9NPJ3:0.412 |
HOH |
3.080 |
ND2 |
O |
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ASN | D:25 | D:20 | 87.0 | 0.544 | S | -88.8 | -169.6 | 27.0 | 0.169 | 0.375 |
C:Q9NPJ3:0.375 |
HOH |
3.231 |
N |
O |
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2cy9 | 1 | Q9CQR4 | 83.57 | 8e-85 |
X-RAY |
2006-01-06 | GLY | A:20 | A:20 | 28.0 | 0.373 | -155.1 | 22.4 | 28.0 | 0.373 | 0.0 | |||||||
GLY | B:20 | B:20 | 93.0 | 1.0 | 360.0 | 171.6 | 93.0 | 1.0 | 0.0 |
HOH |
3.142 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9npj3-f1 | 1 | Q9NPJ3 | 100.0 | 8e-101 | ASN | A:20 | A:20 | 96.0 | 0.6 | S | -92.8 | -165.1 |