Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 24698187 . G A CCDS4558.1:NM_018473.3:c.158gGc>gAc_NP_060943.1:p.53G>D Homo sapiens acyl-CoA thioesterase 13 (ACOT13), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2f0x 1 Q9NPJ3 100.0 6e-100 X-RAY
 2006-10-10 GLY A:53 A:53 31.0 0.413 S 79.5 17.0 31.0 0.413 0.0 SO4
HOH
 8.199
2.743
 N
O
 O2
O
GLY B:53 B:53 24.0 0.32 S 93.1 5.7 24.0 0.32 0.0 SO4
HOH
 8.071
2.629
 N
O
 O2
O
GLY C:53 C:53 30.0 0.4 S 86.5 14.5 30.0 0.4 0.0 SO4
HOH
 8.288
6.819
 N
C
 O4
O
GLY D:53 D:53 32.0 0.427 S 92.8 10.7 32.0 0.427 0.0 SO4
HOH
 7.928
2.688
 N
O
 O4
O
GLY E:53 E:53 32.0 0.427 S 86.3 10.3 NA NA NA
GLY F:53 F:53 25.0 0.333 S 86.3 4.0 NA NA NA
GLY G:53 G:53 30.0 0.4 S 100.2 20.8 NA NA NA
GLY H:53 H:53 32.0 0.427 S 78.6 1.7 NA NA NA
3f5o 1 Q9NPJ3 100.0 6e-100 X-RAY
 2009-08-18 GLY A:53 A:53 30.0 0.4 S 77.8 17.9 30.0 0.4 0.0 CL
UOC
COA
P6G
HOH
 8.222
7.404
8.387
6.603
2.472
 N
N
C
N
O
 CL
CBY
C2P
O13
O
GLY B:53 B:53 22.0 0.293 S 81.9 17.0 22.0 0.293 0.0 UOC
COA
HOH
 7.326
8.718
3.692
 N
C
N
 CBZ
C2P
O
GLY C:53 C:53 23.0 0.307 S 75.9 21.3 23.0 0.307 0.0 CL
UOC
COA
HOH
 8.296
7.321
8.373
2.529
 N
N
C
O
 CL
CBY
C2P
O
GLY D:53 D:53 30.0 0.4 S 72.0 19.4 30.0 0.4 0.0 CL
UOC
COA
P6G
HOH
 8.156
7.207
8.342
5.796
2.595
 N
N
C
N
O
 CL
CBY
C2P
O16
O
GLY E:53 E:53 30.0 0.4 S 81.5 13.9 NA NA NA
GLY F:53 F:53 30.0 0.4 S 77.2 18.6 NA NA NA
GLY G:53 G:53 27.0 0.36 S 69.8 22.9 NA NA NA
GLY H:53 H:53 28.0 0.373 S 72.5 18.9 NA NA NA
2h4u 1 Q9NPJ3 100.0 1e-86 X-RAY
 2006-06-20 GLY A:58 A:53 25.0 0.333 S 69.6 39.6 25.0 0.333 0.0 HOH
 4.536
 O
 O
GLY B:58 B:53 26.0 0.347 S 70.4 34.2 26.0 0.347 0.0 HOH
 6.777
 C
 O
GLY C:58 C:53 28.0 0.373 S 81.9 8.6 28.0 0.373 0.0 HOH
 4.276
 CA
 O
GLY D:58 D:53 20.0 0.267 S 76.0 25.4 20.0 0.267 0.0 HOH
 4.615
 N
 O
2cy9 1 Q9CQR4 83.57 8e-85 X-RAY
 2006-01-06 GLY A:53 A:53 18.0 0.24 S 89.5 -14.9 18.0 0.24 0.0
GLY B:53 B:53 23.0 0.307 S 88.0 -7.8 23.0 0.307 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9npj3-f1 1 Q9NPJ3 100.0 8e-101 GLY A:53 A:53 30.0 0.4 S 76.2 24.6