Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 24698205 | . | T | A | CCDS4558.1:NM_018473.3:c.176tTg>tAg_NP_060943.1:p.59L>* | Homo sapiens acyl-CoA thioesterase 13 (ACOT13), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2f0x | 1 | Q9NPJ3 | 100.0 | 6e-100 |
X-RAY |
2006-10-10 | LEU | A:59 | A:59 | 16.0 | 0.094 | H | -74.3 | -34.4 | 0.0 | 0.0 | 0.094 |
B:Q9NPJ3:0.094 |
SO4 SO4 HOH |
9.745 7.387 4.585 |
CD1 N CD2 |
O4 O4 O |
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LEU | B:59 | B:59 | 18.0 | 0.106 | H | -75.3 | -36.1 | 0.0 | 0.0 | 0.106 |
A:Q9NPJ3:0.106 |
SO4 HOH |
7.334 5.793 |
N CD2 |
O2 O |
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LEU | C:59 | C:59 | 15.0 | 0.088 | H | -75.8 | -39.1 | 0.0 | 0.0 | 0.088 |
D:Q9NPJ3:0.088 |
SO4 HOH |
7.320 4.812 |
N CD2 |
O1 O |
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LEU | D:59 | D:59 | 18.0 | 0.106 | H | -70.8 | -43.0 | 0.0 | 0.0 | 0.106 |
C:Q9NPJ3:0.106 |
SO4 HOH |
7.071 4.719 |
N CD2 |
O4 O |
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LEU | E:59 | E:59 | 17.0 | 0.1 | H | -67.9 | -40.4 | NA | NA | NA | |||||||||||||
LEU | F:59 | F:59 | 16.0 | 0.094 | H | -71.7 | -37.4 | NA | NA | NA | |||||||||||||
LEU | G:59 | G:59 | 18.0 | 0.106 | H | -70.0 | -40.1 | NA | NA | NA | |||||||||||||
LEU | H:59 | H:59 | 17.0 | 0.1 | H | -78.4 | -36.5 | NA | NA | NA | |||||||||||||
3f5o | 1 | Q9NPJ3 | 100.0 | 6e-100 |
X-RAY |
2009-08-18 | LEU | A:59 | A:59 | 17.0 | 0.1 | H | -74.5 | -37.2 | 0.0 | 0.0 | 0.1 |
B:Q9NPJ3:0.1 |
CL COA HOH |
6.930 8.370 5.017 |
N N CD2 |
CL C3P O |
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LEU | B:59 | B:59 | 16.0 | 0.094 | H | -69.5 | -41.7 | 0.0 | 0.0 | 0.094 |
A:Q9NPJ3:0.094 |
UOC COA HOH |
9.058 8.236 4.894 |
N N CD2 |
OCH C3P O |
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LEU | C:59 | C:59 | 16.0 | 0.094 | H | -66.3 | -41.2 | 0.0 | 0.0 | 0.094 |
D:Q9NPJ3:0.094 |
CL COA HOH |
7.019 8.558 4.770 |
N N CD2 |
CL C3P O |
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LEU | D:59 | D:59 | 17.0 | 0.1 | H | -71.3 | -40.6 | 0.0 | 0.0 | 0.1 |
C:Q9NPJ3:0.1 |
CL UOC COA HOH |
6.930 9.949 8.423 4.999 |
N N N CD2 |
CL CBW C2P O |
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LEU | E:59 | E:59 | 17.0 | 0.1 | H | -71.6 | -40.7 | NA | NA | NA | |||||||||||||
LEU | F:59 | F:59 | 16.0 | 0.094 | H | -70.8 | -42.3 | NA | NA | NA | |||||||||||||
LEU | G:59 | G:59 | 16.0 | 0.094 | H | -70.8 | -40.2 | NA | NA | NA | |||||||||||||
LEU | H:59 | H:59 | 19.0 | 0.112 | H | -71.3 | -38.4 | NA | NA | NA | |||||||||||||
2h4u | 1 | Q9NPJ3 | 100.0 | 1e-86 |
X-RAY |
2006-06-20 | LEU | A:64 | A:59 | 15.0 | 0.088 | H | -73.3 | -42.6 | 0.0 | 0.0 | 0.088 |
B:Q9NPJ3:0.088 |
HOH |
4.912 |
CD2 |
O |
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LEU | B:64 | B:59 | 14.0 | 0.082 | H | -69.9 | -47.7 | 0.0 | 0.0 | 0.082 |
A:Q9NPJ3:0.082 |
HOH |
4.843 |
CD2 |
O |
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LEU | C:64 | C:59 | 15.0 | 0.088 | H | -75.1 | -35.8 | 0.0 | 0.0 | 0.088 |
D:Q9NPJ3:0.088 |
HOH |
5.249 |
CD2 |
O |
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LEU | D:64 | D:59 | 10.0 | 0.059 | H | -73.8 | -40.7 | 0.0 | 0.0 | 0.059 |
C:Q9NPJ3:0.059 |
HOH |
4.287 |
CD1 |
O |
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2cy9 | 1 | Q9CQR4 | 83.57 | 8e-85 |
X-RAY |
2006-01-06 | LEU | A:59 | A:59 | 21.0 | 0.124 | H | -69.9 | -53.3 | 21.0 | 0.124 | 0.0 | ||||||
LEU | B:59 | B:59 | 17.0 | 0.1 | H | -92.1 | -36.4 | 17.0 | 0.1 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9npj3-f1 | 1 | Q9NPJ3 | 100.0 | 8e-101 | LEU | A:59 | A:59 | 17.0 | 0.1 | H | -71.0 | -38.3 |