Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 31545258 | . | G | A | CCDS4702.1:NM_000594.3:c.646Gac>Aac_NP_000585.2:p.216D>N | Homo sapiens tumor necrosis factor (TNF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6op0 | 1 | P01375 | 99.37 | 6e-115 |
X-RAY |
2019-12-25 | ASP | A:141 | A:140 | 106.0 | 0.707 | G | -64.9 | -13.9 | 106.0 | 0.707 | 0.0 |
HOH |
4.136 |
O |
O |
||
ASP | B:141 | B:140 | 101.0 | 0.673 | G | -59.3 | -16.9 | 101.0 | 0.673 | 0.0 |
HOH |
7.343 |
O |
O |
|||||||||
ASP | C:141 | C:140 | 99.0 | 0.66 | T | -74.5 | -22.6 | 99.0 | 0.66 | 0.0 | |||||||||||||
7kp9 | 1 | P01375 | 99.37 | 6e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 100.0 | 0.667 | G | -64.8 | -17.7 | 100.0 | 0.667 | 0.0 |
HOH |
4.901 |
OD2 |
O |
||
ASP | B:141 | B:140 | 102.0 | 0.68 | G | -64.0 | -24.5 | 102.0 | 0.68 | 0.0 |
HOH |
4.087 |
O |
O |
|||||||||
ASP | C:141 | C:140 | 100.0 | 0.667 | G | -56.1 | -10.8 | 100.0 | 0.667 | 0.0 |
HOH |
9.068 |
N |
O |
|||||||||
7kpa | 1 | P01375 | 99.37 | 6e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 101.0 | 0.673 | T | -66.9 | -20.3 | 101.0 | 0.673 | 0.0 |
HOH |
5.235 |
OD2 |
O |
||
ASP | B:141 | B:140 | 105.0 | 0.7 | G | -62.4 | -27.0 | 105.0 | 0.7 | 0.0 |
HOH |
3.694 |
O |
O |
|||||||||
ASP | C:141 | C:140 | 101.0 | 0.673 | G | -69.3 | -12.1 | 101.0 | 0.673 | 0.0 | |||||||||||||
7kpb | 1 | P01375 | 99.37 | 6e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 105.0 | 0.7 | G | -63.4 | -25.2 | 101.0 | 0.673 | 0.027 |
G:None:0.027 |
GOL |
7.841 |
N |
O2 |
|
ASP | B:141 | B:140 | 98.0 | 0.653 | G | -75.1 | 6.3 | 98.0 | 0.653 | 0.0 |
GOL GOL |
7.518 4.565 |
N OD1 |
C3 O3 |
|||||||||
ASP | C:141 | C:140 | 105.0 | 0.7 | G | -68.5 | -11.8 | 105.0 | 0.7 | 0.0 | |||||||||||||
5mu8 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2017-03-29 | ASP | A:142 | A:140 | 96.0 | 0.64 | G | -50.7 | -35.3 | 96.0 | 0.64 | 0.0 | ||||||
ASP | B:142 | B:140 | 104.0 | 0.693 | G | -58.9 | -32.6 | 104.0 | 0.693 | 0.0 | |||||||||||||
ASP | C:142 | C:140 | 103.0 | 0.687 | G | -56.8 | -27.2 | NA | NA | NA | |||||||||||||
ASP | D:142 | D:140 | 96.0 | 0.64 | T | -62.5 | -19.1 | NA | NA | NA | |||||||||||||
ASP | E:142 | F:140 | 98.0 | 0.653 | G | -53.3 | -27.8 | NA | NA | NA | |||||||||||||
ASP | F:142 | G:140 | 101.0 | 0.673 | G | -52.5 | -30.2 | NA | NA | NA | |||||||||||||
ASP | G:142 | H:140 | 93.0 | 0.62 | G | -53.2 | -24.4 | NA | NA | NA | |||||||||||||
ASP | H:142 | I:140 | 97.0 | 0.647 | G | -55.9 | -31.4 | NA | NA | NA | |||||||||||||
ASP | I:142 | J:140 | 97.0 | 0.647 | T | -34.6 | -39.5 | NA | NA | NA | |||||||||||||
ASP | J:142 | K:140 | 104.0 | 0.693 | T | -54.0 | -22.7 | NA | NA | NA | |||||||||||||
ASP | K:142 | L:140 | 91.0 | 0.607 | G | -47.5 | -33.8 | NA | NA | NA | |||||||||||||
ASP | L:142 | M:140 | 106.0 | 0.707 | G | -55.9 | -23.3 | NA | NA | NA | |||||||||||||
ASP | M:142 | N:140 | 102.0 | 0.68 | G | -77.7 | 8.1 | NA | NA | NA | |||||||||||||
ASP | N:142 | O:140 | 97.0 | 0.647 | G | -64.4 | -11.8 | NA | NA | NA | |||||||||||||
ASP | O:142 | P:140 | 91.0 | 0.607 | G | -44.0 | -26.6 | NA | NA | NA | |||||||||||||
ASP | P:142 | Q:140 | 100.0 | 0.667 | G | -63.8 | -6.7 | NA | NA | NA | |||||||||||||
ASP | Q:142 | R:140 | 98.0 | 0.653 | G | -48.6 | -31.1 | NA | NA | NA | |||||||||||||
ASP | R:142 | S:140 | 102.0 | 0.68 | G | -54.8 | -23.3 | NA | NA | NA | |||||||||||||
ASP | S:142 | T:140 | 102.0 | 0.68 | T | -70.6 | -24.0 | NA | NA | NA | |||||||||||||
ASP | T:142 | U:140 | 100.0 | 0.667 | G | -67.8 | -25.7 | NA | NA | NA | |||||||||||||
ASP | U:142 | V:140 | 98.0 | 0.653 | G | -58.1 | -34.3 | NA | NA | NA | |||||||||||||
ASP | V:142 | W:140 | 106.0 | 0.707 | G | -63.6 | -13.2 | NA | NA | NA | |||||||||||||
ASP | W:142 | X:140 | 107.0 | 0.713 | G | -62.7 | -25.9 | NA | NA | NA | |||||||||||||
ASP | X:142 | Y:140 | 107.0 | 0.713 | G | -40.7 | -27.3 | NA | NA | NA | |||||||||||||
ASP | Y:142 | Z:140 | 94.0 | 0.627 | G | -53.4 | -29.5 | NA | NA | NA | |||||||||||||
ASP | Z:142 | a:140 | 103.0 | 0.687 | G | -56.7 | -34.4 | NA | NA | NA | |||||||||||||
ASP | AA:142 | b:140 | 91.0 | 0.607 | G | -46.4 | -35.7 | NA | NA | NA | |||||||||||||
ASP | BA:142 | c:140 | 95.0 | 0.633 | G | -63.6 | -0.4 | NA | NA | NA | |||||||||||||
ASP | CA:142 | d:140 | 100.0 | 0.667 | G | -71.8 | 3.1 | NA | NA | NA | |||||||||||||
ASP | DA:142 | e:140 | 101.0 | 0.673 | G | -71.4 | 9.1 | NA | NA | NA | |||||||||||||
ASP | EA:142 | f:140 | 107.0 | 0.713 | G | -52.4 | -43.3 | NA | NA | NA | |||||||||||||
ASP | FA:142 | g:140 | 97.0 | 0.647 | G | -47.7 | -33.8 | NA | NA | NA | |||||||||||||
ASP | GA:142 | h:140 | 97.0 | 0.647 | G | -52.1 | -30.7 | NA | NA | NA | |||||||||||||
ASP | HA:142 | i:140 | 97.0 | 0.647 | G | -50.2 | -33.5 | NA | NA | NA | |||||||||||||
ASP | IA:142 | j:140 | 98.0 | 0.653 | G | -44.2 | -39.5 | NA | NA | NA | |||||||||||||
ASP | JA:142 | k:140 | 100.0 | 0.667 | G | -48.9 | -19.4 | NA | NA | NA | |||||||||||||
ASP | KA:142 | l:140 | 105.0 | 0.7 | G | -64.7 | -7.2 | NA | NA | NA | |||||||||||||
ASP | LA:142 | m:140 | 102.0 | 0.68 | G | -52.0 | -31.6 | NA | NA | NA | |||||||||||||
ASP | MA:142 | n:140 | 101.0 | 0.673 | G | -37.2 | -42.0 | NA | NA | NA | |||||||||||||
ASP | NA:142 | o:140 | 99.0 | 0.66 | T | -67.2 | -40.9 | NA | NA | NA | |||||||||||||
ASP | OA:142 | p:140 | 101.0 | 0.673 | G | -55.9 | -29.0 | NA | NA | NA | |||||||||||||
ASP | PA:142 | q:140 | 106.0 | 0.707 | G | -49.2 | -28.1 | NA | NA | NA | |||||||||||||
ASP | QA:142 | r:140 | 100.0 | 0.667 | G | -60.8 | -31.2 | NA | NA | NA | |||||||||||||
ASP | RA:142 | s:140 | 94.0 | 0.627 | G | -53.1 | -31.0 | NA | NA | NA | |||||||||||||
ASP | SA:142 | t:140 | 102.0 | 0.68 | G | -65.3 | -16.2 | NA | NA | NA | |||||||||||||
ASP | TA:142 | u:140 | 100.0 | 0.667 | G | -48.0 | -27.0 | NA | NA | NA | |||||||||||||
ASP | UA:142 | v:140 | 94.0 | 0.627 | G | -53.9 | -32.9 | NA | NA | NA | |||||||||||||
ASP | VA:142 | w:140 | 101.0 | 0.673 | G | -69.2 | -19.8 | NA | NA | NA | |||||||||||||
6x81 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 105.0 | 0.7 | T | -71.2 | -22.6 | 105.0 | 0.7 | 0.0 |
HOH |
2.846 |
OD1 |
O |
||
ASP | B:141 | B:140 | 96.0 | 0.64 | T | -71.8 | -24.8 | 96.0 | 0.64 | 0.0 |
HOH |
6.363 |
N |
O |
|||||||||
ASP | C:141 | C:140 | 88.0 | 0.587 | T | -73.3 | -18.9 | 88.0 | 0.587 | 0.0 |
HOH |
2.820 |
OD2 |
O |
|||||||||
ASP | D:141 | D:140 | 88.0 | 0.587 | G | -56.2 | -33.1 | NA | NA | NA | |||||||||||||
ASP | E:141 | E:140 | 99.0 | 0.66 | G | -77.1 | -15.6 | NA | NA | NA | |||||||||||||
ASP | F:141 | F:140 | 93.0 | 0.62 | T | -76.5 | -18.9 | NA | NA | NA | |||||||||||||
6x82 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 100.0 | 0.667 | G | -67.6 | -20.1 | 100.0 | 0.667 | 0.0 |
HOH |
3.077 |
OD2 |
O |
||
ASP | B:141 | B:140 | 97.0 | 0.647 | G | -65.8 | -22.2 | 97.0 | 0.647 | 0.0 |
HOH |
4.241 |
O |
O |
|||||||||
ASP | C:141 | C:140 | 99.0 | 0.66 | T | -76.8 | -15.5 | 99.0 | 0.66 | 0.0 |
HOH |
3.248 |
OD2 |
O |
|||||||||
ASP | D:141 | D:140 | 98.0 | 0.653 | G | -70.3 | -17.5 | NA | NA | NA | |||||||||||||
ASP | E:141 | E:140 | 100.0 | 0.667 | G | -70.8 | -15.7 | NA | NA | NA | |||||||||||||
ASP | F:141 | F:140 | 98.0 | 0.653 | T | -71.9 | -19.8 | NA | NA | NA | |||||||||||||
6x83 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 102.0 | 0.68 | G | -72.6 | -24.2 | 102.0 | 0.68 | 0.0 |
HOH |
3.938 |
O |
O |
||
ASP | B:141 | B:140 | 107.0 | 0.713 | G | -72.1 | -22.5 | 107.0 | 0.713 | 0.0 |
HOH |
8.593 |
OD1 |
O |
|||||||||
ASP | C:141 | C:140 | 106.0 | 0.707 | T | -73.0 | -22.1 | 106.0 | 0.707 | 0.0 |
HOH |
4.440 |
O |
O |
|||||||||
ASP | D:141 | D:140 | 104.0 | 0.693 | T | -72.7 | -23.0 | NA | NA | NA | |||||||||||||
ASP | E:141 | E:140 | 103.0 | 0.687 | T | -73.6 | -21.5 | NA | NA | NA | |||||||||||||
ASP | F:141 | F:140 | 105.0 | 0.7 | G | -73.5 | -23.2 | NA | NA | NA | |||||||||||||
6x85 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 91.0 | 0.607 | G | -67.2 | -25.0 | 91.0 | 0.607 | 0.0 | ||||||
ASP | B:141 | B:140 | 100.0 | 0.667 | G | -66.1 | -24.6 | 100.0 | 0.667 | 0.0 | |||||||||||||
ASP | C:141 | C:140 | 99.0 | 0.66 | G | -69.4 | -21.3 | 99.0 | 0.66 | 0.0 | |||||||||||||
ASP | D:141 | D:140 | 90.0 | 0.6 | G | -69.3 | -22.7 | NA | NA | NA | |||||||||||||
ASP | E:141 | E:140 | 95.0 | 0.633 | G | -65.7 | -21.7 | NA | NA | NA | |||||||||||||
ASP | F:141 | F:140 | 97.0 | 0.647 | G | -65.5 | -25.9 | NA | NA | NA | |||||||||||||
6x86 | 1 | P01375 | 100.0 | 9e-115 |
X-RAY |
2021-01-13 | ASP | A:141 | A:140 | 99.0 | 0.66 | G | -69.8 | -28.0 | 99.0 | 0.66 | 0.0 |
HOH |
4.053 |
O |
O |
||
ASP | B:141 | B:140 | 96.0 | 0.64 | G | -68.4 | -27.4 | 96.0 | 0.64 | 0.0 | |||||||||||||
ASP | C:141 | C:140 | 98.0 | 0.653 | G | -68.1 | -27.0 | 98.0 | 0.653 | 0.0 | |||||||||||||
ASP | D:141 | D:140 | 93.0 | 0.62 | G | -69.6 | -29.7 | NA | NA | NA | |||||||||||||
ASP | E:141 | E:140 | 99.0 | 0.66 | G | -67.4 | -27.5 | NA | NA | NA | |||||||||||||
ASP | F:141 | F:140 | 100.0 | 0.667 | G | -67.0 | -28.7 | NA | NA | NA | |||||||||||||
5yoy | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2018-05-09 | ASP | A:148 | A:140 | 100.0 | 0.667 | G | -67.0 | -21.0 | 8.0 | 0.053 | 0.614 |
I:None:0.427 F:None:0.353 |
HOH |
4.273 |
OD2 |
O |
|
ASP | B:148 | B:140 | 99.0 | 0.66 | G | -66.6 | -20.0 | 9.0 | 0.06 | 0.6 |
D:None:0.34 G:None:0.413 |
HOH |
7.089 |
N |
O |
||||||||
ASP | C:148 | C:140 | 101.0 | 0.673 | G | -67.6 | -21.0 | 6.0 | 0.04 | 0.633 |
H:None:0.427 E:None:0.367 |
HOH |
6.836 |
N |
O |
||||||||
ASP | J:148 | J:140 | 99.0 | 0.66 | G | -66.3 | -21.9 | NA | NA | NA | |||||||||||||
ASP | K:148 | K:140 | 103.0 | 0.687 | G | -66.9 | -21.3 | NA | NA | NA | |||||||||||||
ASP | L:148 | L:140 | 98.0 | 0.653 | G | -66.1 | -21.4 | NA | NA | NA | |||||||||||||
7jra | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2020-12-09 | ASP | A:143 | A:216 | 102.0 | 0.68 | G | -68.9 | -19.7 | 102.0 | 0.68 | 0.0 |
HOH |
4.904 |
OD2 |
O |
||
ASP | B:143 | B:216 | 105.0 | 0.7 | G | -69.3 | -19.3 | 105.0 | 0.7 | 0.0 |
HOH |
3.043 |
OD2 |
O |
|||||||||
ASP | C:143 | C:216 | 102.0 | 0.68 | G | -69.6 | -19.2 | 102.0 | 0.68 | 0.0 |
HOH |
8.559 |
CA |
O |
|||||||||
4g3y | 3 | P01375 | 100.0 | 1e-114 |
X-RAY |
2013-03-27 | ASP | C:140 | C:140 | 85.0 | 0.567 | G | -72.4 | -9.8 | 13.0 | 0.087 | 0.48 |
B:None:0.34 A:None:0.26 |
HOH |
7.135 |
OD1 |
O |
|
4twt | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2015-02-04 | ASP | A:140 | A:140 | 98.0 | 0.653 | G | -64.5 | -23.0 | 98.0 | 0.653 | 0.0 |
HOH |
7.811 |
O |
O |
||
ASP | B:140 | B:140 | 101.0 | 0.673 | G | -66.0 | -21.9 | 101.0 | 0.673 | 0.0 |
GOL HOH |
7.208 9.135 |
N O |
O3 O |
|||||||||
ASP | E:140 | C:140 | 97.0 | 0.647 | G | -66.0 | -22.6 | NA | NA | NA | |||||||||||||
ASP | F:140 | D:140 | 104.0 | 0.693 | G | -69.6 | -20.1 | NA | NA | NA | |||||||||||||
5m2i | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2017-08-30 | ASP | A:140 | A:140 | 96.0 | 0.64 | G | -66.9 | -18.0 | 55.0 | 0.367 | 0.273 |
H:None:0.273 |
HOH |
3.027 |
OD2 |
O |
|
ASP | B:140 | B:140 | 95.0 | 0.633 | G | -67.8 | -16.4 | 59.0 | 0.393 | 0.24 |
G:None:0.24 |
HOH |
3.111 |
O |
O |
||||||||
ASP | C:140 | C:140 | 94.0 | 0.627 | G | -68.9 | -16.2 | 59.0 | 0.393 | 0.234 |
I:None:0.233 |
HOH |
3.437 |
OD2 |
O |
||||||||
ASP | D:140 | D:140 | 98.0 | 0.653 | G | -66.8 | -17.9 | NA | NA | NA | |||||||||||||
ASP | E:140 | E:140 | 92.0 | 0.613 | G | -66.6 | -17.7 | NA | NA | NA | |||||||||||||
ASP | F:140 | F:140 | 95.0 | 0.633 | G | -68.2 | -16.7 | NA | NA | NA | |||||||||||||
5m2j | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2017-08-30 | ASP | A:140 | A:140 | 100.0 | 0.667 | G | -67.9 | -18.4 | 100.0 | 0.667 | 0.0 |
HOH |
2.726 |
O |
O |
||
5m2m | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2017-08-30 | ASP | A:140 | A:140 | 108.0 | 0.72 | G | -66.5 | -20.2 | 0.0 | 0.0 | 0.72 |
F:None:0.72 |
HOH |
4.662 |
N |
O |
|
ASP | B:140 | B:140 | 110.0 | 0.733 | G | -67.0 | -19.3 | 0.0 | 0.0 | 0.733 |
D:None:0.733 |
HOH |
3.123 |
O |
O |
||||||||
ASP | C:140 | C:140 | 108.0 | 0.72 | G | -67.4 | -20.4 | 0.0 | 0.0 | 0.72 |
E:None:0.72 |
HOH |
3.326 |
O |
O |
||||||||
ASP | G:140 | G:140 | 109.0 | 0.727 | G | -66.4 | -20.4 | NA | NA | NA | |||||||||||||
ASP | I:140 | I:140 | 109.0 | 0.727 | G | -66.1 | -21.0 | NA | NA | NA | |||||||||||||
ASP | K:140 | M:140 | 128.0 | 0.853 | -69.1 | 360.0 | NA | NA | NA | ||||||||||||||
5wux | 3 | C1K3N5 | 100.0 | 1e-114 |
X-RAY |
2017-06-07 | ASP | G:140 | E:140 | 83.0 | 0.553 | G | -80.4 | -5.2 | NA | NA | NA | ||||||
ASP | H:140 | F:140 | 95.0 | 0.633 | G | -65.8 | -28.8 | 50.0 | 0.333 | 0.3 |
B:None:0.3 |
||||||||||||
ASP | I:140 | G:140 | 93.0 | 0.62 | G | -51.2 | -39.6 | NA | NA | NA | |||||||||||||
6ooy | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2019-12-25 | ASP | A:140 | A:140 | 104.0 | 0.693 | T | -72.1 | -22.7 | 104.0 | 0.693 | 0.0 |
HOH |
8.248 |
N |
O |
||
ASP | B:140 | B:140 | 105.0 | 0.7 | G | -60.2 | -21.3 | 105.0 | 0.7 | 0.0 |
HOH |
4.266 |
O |
O |
|||||||||
ASP | C:140 | C:140 | 97.0 | 0.647 | T | -76.2 | -15.4 | 97.0 | 0.647 | 0.0 | |||||||||||||
6ooz | 1 | P01375 | 100.0 | 1e-114 |
X-RAY |
2019-12-25 | ASP | A:140 | A:140 | 103.0 | 0.687 | G | -60.4 | -21.2 | 103.0 | 0.687 | 0.0 |
HOH |
9.235 |
N |
O |
||
ASP | B:140 | B:140 | 106.0 | 0.707 | G | -52.5 | -29.3 | 106.0 | 0.707 | 0.0 |
HOH |
3.821 |
O |
O |
|||||||||
ASP | C:140 | C:140 | 105.0 | 0.7 | G | -54.7 | -30.4 | 105.0 | 0.7 | 0.0 |
HOH |
2.877 |
OD2 |
O |
|||||||||
6rmj | 1 | P01375 | 99.37 | 3e-114 |
X-RAY |
2019-10-09 | ASP | A:146 | A:140 | 90.0 | 0.6 | G | -68.7 | -18.2 | 90.0 | 0.6 | 0.0 |
HOH |
6.034 |
O |
O |
||
ASP | B:146 | B:140 | 98.0 | 0.653 | G | -70.0 | -17.8 | 98.0 | 0.653 | 0.0 |
HOH |
7.569 |
N |
O |
|||||||||
ASP | C:146 | C:140 | 102.0 | 0.68 | G | -69.9 | -16.8 | 102.0 | 0.68 | 0.0 |
HOH |
8.810 |
H |
O |
|||||||||
5uui | 1 | P01375 | 98.73 | 1e-113 |
X-RAY |
2017-08-02 | ASP | A:141 | A:140 | 97.0 | 0.647 | G | -73.0 | -9.8 | 97.0 | 0.647 | 0.0 |
HOH |
2.572 |
OD1 |
O |
||
1a8m | 1 | P01375 | 99.36 | 1e-113 |
X-RAY |
1998-06-17 | ASP | A:140 | A:140 | 103.0 | 0.687 | G | -63.2 | -15.9 | 103.0 | 0.687 | 0.0 |
HOH |
8.896 |
N |
O |
||
ASP | B:140 | B:140 | 88.0 | 0.587 | T | -77.7 | -34.7 | 88.0 | 0.587 | 0.0 |
HOH |
4.160 |
CB |
O |
|||||||||
ASP | C:140 | C:140 | 101.0 | 0.673 | T | -87.5 | -7.5 | 101.0 | 0.673 | 0.0 |
HOH |
3.654 |
CB |
O |
|||||||||
3wd5 | 1 | P01375 | 99.36 | 1e-113 |
X-RAY |
2013-08-14 | ASP | A:140 | A:140 | 96.0 | 0.64 | G | -80.2 | -3.7 | 68.0 | 0.453 | 0.187 |
B:None:0.187 |
HOH |
7.334 |
O |
O |
|
1tnf | 1 | P01375 | 99.36 | 5e-113 |
X-RAY |
1990-01-15 | ASP | A:140 | A:140 | 105.0 | 0.7 | G | -55.4 | -26.1 | 105.0 | 0.7 | 0.0 | ||||||
ASP | B:140 | B:140 | 95.0 | 0.633 | G | -62.7 | -13.1 | 95.0 | 0.633 | 0.0 | |||||||||||||
ASP | C:140 | C:140 | 100.0 | 0.667 | G | -69.3 | -36.4 | 100.0 | 0.667 | 0.0 | |||||||||||||
2tun | 1 | P01375 | 98.73 | 2e-112 |
X-RAY |
1994-01-31 | ASP | A:140 | A:140 | 92.0 | 0.613 | G | -63.7 | -30.0 | 58.0 | 0.387 | 0.226 |
D:P01375:0.227 |
|||||
ASP | B:140 | B:140 | 101.0 | 0.673 | T | -96.0 | -34.4 | 101.0 | 0.673 | 0.0 | |||||||||||||
ASP | C:140 | C:140 | 90.0 | 0.6 | T | -71.7 | 32.4 | 90.0 | 0.6 | 0.0 | |||||||||||||
ASP | D:140 | D:140 | 88.0 | 0.587 | G | -77.7 | 16.0 | 54.0 | 0.36 | 0.227 |
A:P01375:0.227 |
||||||||||||
ASP | E:140 | E:140 | 74.0 | 0.493 | T | -72.6 | -49.5 | 74.0 | 0.493 | 0.0 | |||||||||||||
ASP | F:140 | F:140 | 92.0 | 0.613 | G | -59.7 | 1.0 | 92.0 | 0.613 | 0.0 | |||||||||||||
3it8 | 1 | P01375 | 99.34 | 1e-109 |
X-RAY |
2009-10-20 | ASP | A:144 | A:140 | 94.0 | 0.627 | G | -76.4 | -10.5 | 94.0 | 0.627 | 0.0 |
HOH |
8.701 |
N |
O |
||
ASP | B:144 | B:140 | 93.0 | 0.62 | G | -75.6 | -11.9 | 93.0 | 0.62 | 0.0 |
HOH |
8.833 |
N |
O |
|||||||||
ASP | C:144 | C:140 | 95.0 | 0.633 | G | -76.3 | -11.0 | 95.0 | 0.633 | 0.0 |
HOH |
8.568 |
N |
O |
|||||||||
ASP | G:144 | G:140 | 94.0 | 0.627 | G | -76.3 | -10.4 | NA | NA | NA | |||||||||||||
ASP | H:144 | H:140 | 95.0 | 0.633 | G | -76.7 | -10.7 | NA | NA | NA | |||||||||||||
ASP | I:144 | I:140 | 94.0 | 0.627 | G | -76.0 | -10.9 | NA | NA | NA | |||||||||||||
3alq | 1 | P01375 | 96.18 | 2e-109 |
X-RAY |
2010-11-17 | ASP | A:140 | A:140 | 98.0 | 0.653 | G | -76.9 | -2.8 | 98.0 | 0.653 | 0.0 | ||||||
ASP | B:140 | B:140 | 99.0 | 0.66 | G | -69.8 | -3.6 | 99.0 | 0.66 | 0.0 | |||||||||||||
ASP | C:140 | C:140 | 96.0 | 0.64 | G | -67.8 | -10.0 | 96.0 | 0.64 | 0.0 |
HOH |
9.091 |
O |
O |
|||||||||
ASP | D:140 | D:140 | 95.0 | 0.633 | G | -68.4 | -13.5 | NA | NA | NA | |||||||||||||
ASP | E:140 | E:140 | 93.0 | 0.62 | G | -81.6 | -7.4 | NA | NA | NA | |||||||||||||
ASP | F:140 | F:140 | 95.0 | 0.633 | T | -82.5 | -3.2 | NA | NA | NA | |||||||||||||
3l9j | 2 | P01375 | 100.0 | 1e-108 |
X-RAY |
2010-02-23 | ASP | B:132 | T:140 | 99.0 | 0.66 | G | -70.2 | -20.1 | 11.0 | 0.073 | 0.587 |
A:None:0.587 |
HOH |
3.311 |
OD1 |
O |
|
2az5 | 1 | P01375 | 100.0 | 6e-108 |
X-RAY |
2005-11-29 | ASP | A:131 | A:140 | 102.0 | 0.68 | G | -64.4 | -20.7 | 102.0 | 0.68 | 0.0 |
HOH |
2.460 |
OD1 |
O |
||
ASP | B:131 | B:140 | 104.0 | 0.693 | G | -70.2 | -22.7 | 104.0 | 0.693 | 0.0 |
HOH |
2.199 |
OD1 |
O |
|||||||||
ASP | C:131 | C:140 | 101.0 | 0.673 | G | -62.1 | -27.3 | 101.0 | 0.673 | 0.0 |
HOH |
6.799 |
N |
O |
|||||||||
ASP | D:131 | D:140 | 103.0 | 0.687 | G | -71.8 | -19.7 | 103.0 | 0.687 | 0.0 |
HOH |
3.688 |
O |
O |
|||||||||
4tsv | 1 | P01375 | 98.0 | 6e-107 |
X-RAY |
1998-12-30 | ASP | A:133 | A:140 | 97.0 | 0.647 | G | -78.9 | -5.2 | 97.0 | 0.647 | 0.0 |
HOH |
3.094 |
O |
O |
||
5tsw | 1 | P01375 | 98.0 | 6e-107 |
X-RAY |
1999-05-07 | ASP | A:133 | A:140 | 99.0 | 0.66 | T | -78.1 | -7.7 | 99.0 | 0.66 | 0.0 |
HOH |
6.552 |
OD1 |
H2 |
||
ASP | B:133 | B:140 | 93.0 | 0.62 | G | -66.9 | -24.8 | 93.0 | 0.62 | 0.0 |
HOH |
2.859 |
O |
H1 |
|||||||||
ASP | C:133 | C:140 | 93.0 | 0.62 | T | -78.5 | -15.3 | 93.0 | 0.62 | 0.0 |
HOH |
2.779 |
CB |
H1 |
|||||||||
ASP | D:133 | D:140 | 100.0 | 0.667 | T | -82.2 | -9.0 | NA | NA | NA | |||||||||||||
ASP | E:133 | E:140 | 90.0 | 0.6 | G | -65.1 | -36.3 | NA | NA | NA | |||||||||||||
ASP | F:133 | F:140 | 95.0 | 0.633 | G | -70.1 | -16.8 | NA | NA | NA | |||||||||||||
2e7a | 1 | P01375 | 92.36 | 9e-106 |
X-RAY |
2007-11-13 | ASP | A:140 | A:140 | 98.0 | 0.653 | G | -71.3 | -11.0 | 98.0 | 0.653 | 0.0 |
HOH |
2.627 |
OD2 |
O |
||
ASP | B:140 | B:140 | 92.0 | 0.613 | G | -68.0 | -20.9 | 92.0 | 0.613 | 0.0 |
HOH |
2.868 |
OD2 |
O |
|||||||||
ASP | C:140 | C:140 | 95.0 | 0.633 | T | -73.1 | -9.5 | 95.0 | 0.633 | 0.0 |
HOH |
3.516 |
C |
O |
|||||||||
2zjc | 1 | P01375 | 92.99 | 3e-105 |
X-RAY |
2009-01-20 | ASP | A:140 | A:140 | 99.0 | 0.66 | G | -75.4 | 7.4 | 99.0 | 0.66 | 0.0 |
HOH |
6.914 |
OD1 |
O |
||
ASP | B:140 | B:140 | 70.0 | 0.467 | T | -76.3 | -19.7 | 70.0 | 0.467 | 0.0 |
HOH |
2.602 |
OD2 |
O |
|||||||||
ASP | C:140 | C:140 | 94.0 | 0.627 | G | -74.9 | 5.7 | 94.0 | 0.627 | 0.0 |
HOH |
4.497 |
O |
O |
|||||||||
2zpx | 1 | P01375 | 92.36 | 3e-104 |
X-RAY |
2009-03-24 | ASP | A:140 | A:140 | 98.0 | 0.653 | T | -93.1 | -22.1 | 98.0 | 0.653 | 0.0 |
HOH |
4.172 |
O |
O |
||
ASP | B:140 | B:140 | 107.0 | 0.713 | T | -94.3 | -22.1 | 107.0 | 0.713 | 0.0 | |||||||||||||
ASP | C:140 | C:140 | 103.0 | 0.687 | T | -108.9 | 3.5 | 103.0 | 0.687 | 0.0 | |||||||||||||
7kp7 | 1 | P06804 | 80.54 | 4e-88 |
X-RAY |
2021-01-13 | LYS | A:131 | B:140 | 148.0 | 0.74 | G | -55.8 | -28.9 | 148.0 | 0.74 | 0.0 |
HOH |
3.028 |
N |
O |
||
LYS | B:131 | A:140 | 80.0 | NA | G | -54.2 | -29.9 | 80.0 | NA | NA |
HOH |
3.167 |
N |
O |
|||||||||
LYS | C:131 | C:140 | 80.0 | NA | G | -54.1 | -30.9 | 80.0 | NA | NA |
HOH |
2.881 |
N |
O |
|||||||||
7kp8 | 1 | P06804 | 80.41 | 1e-87 |
X-RAY |
2021-01-13 | LYS | A:130 | A:139 | 88.0 | NA | G | -55.2 | -31.1 | 88.0 | NA | NA | ||||||
LYS | B:130 | B:139 | 84.0 | NA | G | -55.4 | -30.0 | 84.0 | NA | NA | |||||||||||||
LYS | C:130 | C:139 | 86.0 | NA | G | -54.2 | -30.9 | 86.0 | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p01375-f1 | 1 | P01375 | 100.0 | 2e-174 | ASP | A:216 | A:216 | 106.0 | 0.707 | G | -61.1 | -21.1 |