Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 31918154 | . | A | C | CCDS4729.1:NM_001710.5:c.1598aAg>aCg_NP_001701.2:p.533K>T | Homo sapiens complement factor B (CFB), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7jtn | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | LYS | A:533 | A:508 | 135.0 | 0.675 | -77.8 | 163.7 | 135.0 | 0.675 | 0.0 | |||||||
LYS | C:533 | C:508 | 132.0 | 0.66 | -77.9 | 163.7 | NA | NA | NA | ||||||||||||||
7jtq | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | LYS | A:533 | A:508 | 159.0 | 0.795 | -95.4 | 160.2 | 159.0 | 0.795 | 0.0 | |||||||
LYS | C:533 | C:508 | 155.0 | 0.775 | -95.4 | 160.2 | NA | NA | NA | ||||||||||||||
2ok5 | 1 | P00751 | 99.86 | 0.0 |
X-RAY |
2007-02-27 | LYS | A:518 | A:508 | 133.0 | 0.665 | -71.7 | 149.9 | 133.0 | 0.665 | 0.0 |
HOH |
5.483 |
N |
O |
|||
2xwj | 3 | P00751 | 99.73 | 0.0 |
X-RAY |
2011-01-12 | LYS | I:508 | I:508 | 103.0 | 0.515 | -85.2 | -171.4 | 103.0 | 0.515 | 0.0 | |||||||
LYS | J:508 | J:508 | 104.0 | 0.52 | -85.4 | -171.3 | NA | NA | NA | ||||||||||||||
LYS | K:508 | K:508 | 104.0 | 0.52 | -85.6 | -170.9 | NA | NA | NA | ||||||||||||||
LYS | L:508 | L:508 | 105.0 | 0.525 | -85.5 | -171.3 | NA | NA | NA | ||||||||||||||
3hrz | 4 | P00751 | 99.73 | 0.0 |
X-RAY |
2009-07-07 | LYS | D:508 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3hs0 | 4 | P00751 | 99.73 | 0.0 |
X-RAY |
2009-07-07 | LYS | D:508 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | H:508 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
2xwb | 3 | P00751 | 99.73 | 0.0 |
X-RAY |
2011-01-12 | LYS | E:499 | F:508 | 101.0 | 0.505 | -89.5 | 164.6 | 101.0 | 0.505 | 0.0 | |||||||
LYS | F:499 | H:508 | 101.0 | 0.505 | -88.7 | 165.9 | NA | NA | NA | ||||||||||||||
2win | 3 | P00751 | 100.0 | 0.0 |
X-RAY |
2009-06-09 | LYS | I:274 | I:508 | 108.0 | 0.54 | -88.6 | 177.5 | NA | NA | NA | |||||||
LYS | J:274 | J:508 | 109.0 | 0.545 | -88.6 | 177.5 | 109.0 | 0.545 | 0.0 | ||||||||||||||
LYS | K:274 | K:508 | 109.0 | 0.545 | -88.7 | 177.5 | NA | NA | NA | ||||||||||||||
LYS | L:274 | L:508 | 111.0 | 0.555 | -88.6 | 177.6 | 111.0 | 0.555 | 0.0 | ||||||||||||||
6rur | 5 | P00751 | 99.6 | 0.0 |
X-RAY |
2019-08-21 | LYS | I:274 | J:508 | 91.0 | 0.455 | -83.3 | 151.8 | 91.0 | 0.455 | 0.0 | |||||||
LYS | J:274 | L:508 | 84.0 | 0.42 | -83.8 | 152.2 | 84.0 | 0.42 | 0.0 | ||||||||||||||
6ruv | 6 | P00751 | 99.6 | 0.0 |
X-RAY |
2019-08-21 | LYS | K:274 | J:508 | 88.0 | 0.44 | -94.4 | 160.8 | 88.0 | 0.44 | 0.0 | |||||||
LYS | L:274 | L:508 | 88.0 | 0.44 | -93.4 | 158.1 | 88.0 | 0.44 | 0.0 | ||||||||||||||
1rrk | 1 | P00751 | 99.4 | 0.0 |
X-RAY |
2004-12-14 | LYS | A:266 | A:508 | 98.0 | 0.49 | -92.1 | 145.4 | 98.0 | 0.49 | 0.0 |
HOH |
2.911 |
N |
O |
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1rs0 | 1 | P00751 | 99.4 | 0.0 |
X-RAY |
2004-12-14 | LYS | A:266 | A:508 | 99.0 | 0.495 | -91.4 | 143.6 | 99.0 | 0.495 | 0.0 |
HOH |
2.791 |
N |
O |
|||
1rtk | 1 | P00751 | 99.4 | 0.0 |
X-RAY |
2004-12-14 | LYS | A:266 | A:508 | 106.0 | 0.53 | -86.7 | 146.7 | 106.0 | 0.53 | 0.0 |
HOH |
2.969 |
N |
O |
|||
1dle | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2000-12-13 | LYS | A:67 | A:62 | 85.0 | 0.425 | T | -71.7 | -16.6 | 85.0 | 0.425 | 0.0 |
HOH |
2.760 |
O |
O |
||
LYS | B:67 | B:62 | 93.0 | 0.465 | T | -69.2 | -17.0 | 93.0 | 0.465 | 0.0 |
HOH |
2.756 |
O |
O |
|||||||||
6qsw | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2019-03-27 | LYS | A:60 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | B:60 | BBB:60 | 43.0 | NA | S | -105.5 | 131.7 | NA | NA | NA | |||||||||||||
LYS | C:60 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6qsx | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2019-03-27 | LYS | A:60 | AAA:62 | 48.0 | 0.24 | G | -52.0 | -43.2 | 48.0 | 0.24 | 0.0 |
HOH |
2.199 |
H |
O |
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LYS | B:60 | BBB:62 | 57.0 | 0.285 | G | -50.4 | -44.1 | NA | NA | NA | |||||||||||||
6rav | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2019-04-17 | LYS | A:60 | AAA:62 | 44.0 | 0.22 | G | -52.0 | -46.4 | 44.0 | 0.22 | 0.0 |
HOH |
2.037 |
HZ1 |
O |
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LYS | B:60 | BBB:62 | 62.0 | 0.31 | G | -52.4 | -47.5 | NA | NA | NA | |||||||||||||
6t8u | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2020-03-04 | LYS | A:60 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | B:60 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
LYS | C:60 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6t8v | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2020-03-04 | LYS | A:60 | AAA:62 | 43.0 | 0.215 | G | -55.1 | -40.6 | 43.0 | 0.215 | 0.0 |
HOH |
4.738 |
N |
O |
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LYS | B:60 | BBB:62 | 65.0 | 0.325 | G | -53.4 | -45.9 | NA | NA | NA | |||||||||||||
6t8w | 1 | P00751 | 100.0 | 0.0 |
X-RAY |
2020-03-04 | LYS | A:60 | AAA:62 | 46.0 | 0.23 | G | -52.2 | -42.2 | 46.0 | 0.23 | 0.0 |
HOH |
2.726 |
NZ |
O |
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LYS | B:60 | BBB:62 | 61.0 | 0.305 | G | -53.7 | -45.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00751-f1 | 1 | P00751 | 100.0 | 0.0 | LYS | A:533 | A:533 | 114.0 | 0.57 | -100.5 | 156.9 |