Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr6 | 32489754 | . | T | A | CCDS4751.1:NM_002125.3:c.298Agg>Tgg_NP_002116.2:p.100R>W | Homo sapiens major histocompatibility complex, class II, DR beta 5 (HLA-DRB5), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zgl | 2 | Q29787 | 100.0 | 2e-145 |
X-RAY |
2005-10-18 | ARG | B:71 | B:71 | 58.0 | 0.258 | H | -84.4 | -39.9 | 0.0 | 0.0 | 0.258 |
E:P01850:0.102 C:Q6AI64:0.204 |
|||||
ARG | G:71 | E:71 | 60.0 | 0.267 | H | -75.0 | -33.6 | NA | NA | NA | |||||||||||||
ARG | L:71 | H:71 | 54.0 | 0.24 | H | -69.4 | -31.0 | NA | NA | NA | |||||||||||||
ARG | Q:71 | K:71 | 64.0 | 0.284 | H | -71.6 | -43.4 | NA | NA | NA | |||||||||||||
1fv1 | 2 | Q30154 | 100.0 | 6e-144 |
X-RAY |
2000-09-27 | ARG | B:71 | B:71 | 62.0 | 0.276 | H | -64.4 | -25.7 | 17.0 | 0.076 | 0.2 |
C:P02686:0.2 |
HOH |
2.697 |
NH2 |
O |
|
ARG | E:71 | E:71 | 49.0 | 0.218 | H | -59.8 | -24.5 | NA | NA | NA | |||||||||||||
1h15 | 2 | Q30126 | 100.0 | 6e-144 |
X-RAY |
2002-10-03 | ARG | B:71 | B:71 | 61.0 | 0.271 | H | -61.9 | -27.3 | 20.0 | 0.089 | 0.182 |
C:P03198:0.182 |
|||||
ARG | E:71 | E:71 | 60.0 | 0.267 | T | -72.7 | -30.7 | NA | NA | NA | |||||||||||||
1hqr | 2 | Q29703 | 100.0 | 6e-144 |
X-RAY |
2001-01-03 | ARG | B:71 | B:271 | 56.0 | 0.249 | H | -80.2 | -32.4 | 9.0 | 0.04 | 0.209 |
C:P02686:0.209 |
|||||
3pdo | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | ARG | B:72 | B:71 | 70.0 | 0.311 | H | -65.4 | -39.7 | 17.0 | 0.076 | 0.235 |
C:P04233:0.236 |
HOH |
2.567 |
O |
O |
|
3pgc | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | ARG | B:72 | B:71 | 76.0 | 0.338 | H | -72.1 | -36.5 | 13.0 | 0.058 | 0.28 |
C:P04233:0.28 |
HOH |
5.224 |
O |
O |
|
ARG | E:72 | E:71 | 77.0 | 0.342 | H | -59.1 | -42.5 | NA | NA | NA | |||||||||||||
3pgd | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2010-12-08 | ARG | B:72 | B:71 | 47.0 | 0.209 | H | -59.9 | -52.2 | 3.0 | 0.013 | 0.196 |
C:P04233:0.196 |
HOH |
3.199 |
NH1 |
O |
|
ARG | E:72 | E:71 | 47.0 | 0.209 | H | -62.6 | -47.6 | NA | NA | NA | |||||||||||||
4aen | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2012-08-01 | ARG | B:72 | B:71 | 78.0 | 0.347 | H | -61.2 | -37.4 | 20.0 | 0.089 | 0.258 |
C:P04233:0.258 |
HOH |
2.732 |
O |
O |
|
4x5w | 2 | P04229 | 91.92 | 5e-136 |
X-RAY |
2016-03-09 | ARG | B:72 | B:71 | 72.0 | 0.32 | H | -67.6 | -34.8 | 28.0 | 0.124 | 0.196 |
C:P04233:0.196 |
HOH |
2.651 |
O |
O |
|
1aqd | 2 | P04229 | 91.92 | 7e-136 |
X-RAY |
1998-01-28 | ARG | B:71 | B:71 | 51.0 | 0.227 | H | -63.4 | -46.9 | 3.0 | 0.013 | 0.214 |
C:P01892:0.213 |
HOH |
6.616 |
NH2 |
O |
|
ARG | E:71 | E:71 | 51.0 | 0.227 | H | -66.4 | -41.8 | NA | NA | NA | |||||||||||||
ARG | H:71 | H:71 | 48.0 | 0.213 | H | -65.2 | -46.8 | NA | NA | NA | |||||||||||||
ARG | K:71 | K:71 | 56.0 | 0.249 | H | -67.1 | -38.0 | NA | NA | NA | |||||||||||||
4ah2 | 2 | P04233,P04229 | 91.88 | 1e-135 |
X-RAY |
2012-08-01 | ARG | B:102 | B:71 | 11.0 | 0.049 | H | -57.8 | -40.8 | 11.0 | 0.049 | 0.0 |
HOH |
3.169 |
NH1 |
O |
||
4x5x | 2 | P04229 | 91.37 | 2e-134 |
X-RAY |
2016-03-09 | ARG | B:102 | B:71 | 9.0 | 0.04 | H | -80.5 | -25.5 | 9.0 | 0.04 | 0.0 | ||||||
ARG | D:102 | D:71 | 17.0 | 0.076 | H | -81.0 | -26.8 | NA | NA | NA | |||||||||||||
4fqx | 5 | P04229 | 88.12 | 2e-132 |
X-RAY |
2013-01-09 | ARG | E:77 | B:71 | 51.0 | 0.227 | H | -66.7 | -41.0 | 32.0 | 0.142 | 0.085 |
C:None:0.084 |
HOH |
3.287 |
NH2 |
O |
|
4gbx | 4 | P04229 | 88.12 | 2e-132 |
X-RAY |
2013-01-16 | ARG | D:77 | B:71 | 57.0 | 0.253 | H | -61.6 | -39.7 | NA | NA | NA | ||||||
4i5b | 2 | P04229 | 91.67 | 5e-132 |
X-RAY |
2013-12-04 | ARG | B:70 | B:71 | 56.0 | 0.249 | H | -61.1 | -38.1 | 5.0 | 0.022 | 0.227 |
C:None:0.227 |
HOH |
3.768 |
NH2 |
O |
|
ARG | E:70 | E:71 | 47.0 | 0.209 | H | -60.5 | -38.3 | NA | NA | NA | |||||||||||||
3l6f | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2010-05-12 | ARG | B:72 | B:71 | 54.0 | 0.24 | H | -65.5 | -39.7 | 3.0 | 0.013 | 0.227 |
C:Q16655:0.227 |
HOH |
4.454 |
O |
O |
|
3s4s | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2011-09-21 | ARG | B:72 | B:71 | 53.0 | 0.236 | H | -62.4 | -40.2 | 4.0 | 0.018 | 0.218 |
C:Q9YS52:0.218 |
HOH |
9.392 |
CG |
O |
|
ARG | F:72 | E:71 | 65.0 | 0.289 | H | -73.3 | -51.2 | NA | NA | NA | |||||||||||||
3s5l | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2011-09-21 | ARG | C:72 | B:71 | 56.0 | 0.249 | H | -61.6 | -35.3 | 6.0 | 0.027 | 0.222 |
E:None:0.222 |
HOH |
3.335 |
NH2 |
O |
|
ARG | D:72 | E:71 | 55.0 | 0.244 | H | -64.8 | -45.4 | NA | NA | NA | |||||||||||||
1fyt | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
2000-11-08 | ARG | B:71 | B:71 | 55.0 | 0.244 | H | -60.7 | -40.2 | 0.0 | 0.0 | 0.244 |
D:RWHUAC:0.031 C:P03437:0.244 |
HOH |
9.403 |
CB |
O |
|
1seb | 2 | P04229 | 91.67 | 2e-131 |
X-RAY |
1996-06-20 | ARG | B:71 | B:71 | 46.0 | 0.204 | H | -61.3 | -45.1 | 7.0 | 0.031 | 0.173 |
C:None:0.173 |
|||||
ARG | F:71 | F:71 | 44.0 | 0.196 | H | -61.3 | -45.1 | 6.0 | 0.027 | 0.169 |
G:None:0.169 |
||||||||||||
6hby | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2019-08-14 | ARG | B:72 | B:71 | 75.0 | 0.333 | H | -68.9 | -41.2 | 12.0 | 0.053 | 0.28 |
C:None:0.28 |
EDO EDO EDO EDO HOH |
7.890 6.800 2.978 9.644 4.893 |
NH1 NH1 NH1 O N |
O2 C1 O1 C1 O |
|
ARG | E:72 | E:71 | 74.0 | 0.329 | H | -71.5 | -41.5 | NA | NA | NA | |||||||||||||
6qza | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | ARG | B:72 | BBB:71 | 44.0 | 0.196 | H | -72.6 | -42.0 | 0.0 | 0.0 | 0.196 |
C:None:0.196 |
|||||
ARG | E:72 | EEE:71 | 49.0 | 0.218 | H | -72.8 | -41.2 | NA | NA | NA | |||||||||||||
6qzc | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | ARG | B:72 | BBB:71 | 53.0 | 0.236 | H | -63.1 | -43.7 | 4.0 | 0.018 | 0.218 |
C:None:0.218 |
EDO HOH |
4.341 3.458 |
NH2 NH1 |
C1 O |
|
6qzd | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | ARG | B:72 | BBB:71 | 54.0 | 0.24 | H | -74.9 | -32.2 | 3.0 | 0.013 | 0.227 |
C:P05777:0.227 |
HOH |
9.605 |
CB |
O |
|
ARG | E:72 | EEE:71 | 55.0 | 0.244 | H | -74.7 | -32.4 | NA | NA | NA | |||||||||||||
6r0e | 2 | P04229 | 92.11 | 8e-131 |
X-RAY |
2020-07-15 | ARG | B:72 | BBB:71 | 60.0 | 0.267 | H | -53.4 | -36.6 | 3.0 | 0.013 | 0.254 |
E:None:0.04 C:P03435:0.244 |
SO4 HOH |
7.431 2.949 |
N NH1 |
O2 O |
|
5v4n | 2 | P04229 | 91.62 | 8e-131 |
X-RAY |
2017-05-03 | ARG | B:97 | C:320 | 0.0 | 0.0 | H | -70.0 | -45.8 | 0.0 | 0.0 | 0.0 | ||||||
ARG | D:97 | F:320 | 0.0 | 0.0 | H | -68.3 | -46.4 | NA | NA | NA | |||||||||||||
1hxy | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2001-06-27 | ARG | B:71 | B:71 | 61.0 | 0.271 | H | -63.8 | -33.6 | 2.0 | 0.009 | 0.262 |
C:6470273:0.262 |
HOH |
5.797 |
NH2 |
O |
|
1jwm | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | ARG | B:71 | B:71 | 52.0 | 0.231 | H | -63.8 | -50.1 | 5.0 | 0.022 | 0.209 |
C:None:0.209 |
HOH |
3.870 |
NH2 |
O |
|
1jws | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | ARG | B:71 | B:71 | 54.0 | 0.24 | H | -62.9 | -40.8 | 5.0 | 0.022 | 0.218 |
C:None:0.218 |
HOH |
3.422 |
NH2 |
O |
|
1jwu | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2003-07-08 | ARG | B:71 | B:71 | 55.0 | 0.244 | H | -59.6 | -42.9 | 6.0 | 0.027 | 0.217 |
C:None:0.218 |
HOH |
3.336 |
NE |
O |
|
1klg | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-08-02 | ARG | B:71 | B:71 | 42.0 | 0.187 | H | -63.6 | -44.2 | 1.0 | 0.004 | 0.183 |
C:None:0.182 |
HOH |
3.744 |
NH2 |
O |
|
1klu | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-08-02 | ARG | B:71 | B:71 | 64.0 | 0.284 | H | -64.1 | -40.4 | 8.0 | 0.036 | 0.248 |
C:None:0.249 |
HOH |
3.083 |
NH2 |
O |
|
1lo5 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2002-12-18 | ARG | B:71 | B:71 | 56.0 | 0.249 | H | -45.5 | -9.6 | 5.0 | 0.022 | 0.227 |
C:None:0.227 |
HOH |
6.400 |
O |
O |
|
1pyw | 2 | P13758 | 92.11 | 1e-130 |
X-RAY |
2003-12-09 | ARG | B:71 | B:71 | 49.0 | 0.218 | H | -61.4 | -39.4 | 7.0 | 0.031 | 0.187 |
C:3212739:0.187 |
HOH |
2.769 |
O |
O |
|
1r5i | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-03-16 | ARG | B:71 | B:71 | 57.0 | 0.253 | H | -62.4 | -47.7 | 0.0 | 0.0 | 0.253 |
D:Q48898:0.004 C:P11133:0.253 |
HOH |
4.789 |
O |
O |
|
ARG | F:71 | F:71 | 57.0 | 0.253 | H | -63.1 | -44.7 | NA | NA | NA | |||||||||||||
1sje | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | ARG | B:71 | B:71 | 48.0 | 0.213 | H | -57.4 | -39.9 | 8.0 | 0.036 | 0.177 |
C:P12495:0.178 |
HOH |
2.755 |
O |
O |
|
1sjh | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | ARG | B:71 | B:71 | 45.0 | 0.2 | H | -58.5 | -41.3 | 6.0 | 0.027 | 0.173 |
C:P12495:0.173 |
HOH |
2.843 |
O |
O |
|
1t5w | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | ARG | B:71 | B:71 | 53.0 | 0.236 | H | -64.1 | -40.1 | 8.0 | 0.036 | 0.2 |
C:P27705:0.2 |
HOH |
3.740 |
NH2 |
O |
|
ARG | E:71 | E:71 | 54.0 | 0.24 | H | -65.5 | -40.9 | NA | NA | NA | |||||||||||||
1t5x | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2004-08-17 | ARG | B:71 | B:71 | 49.0 | 0.218 | H | -60.7 | -41.6 | 6.0 | 0.027 | 0.191 |
C:P27705:0.191 |
HOH |
4.563 |
NH1 |
O |
|
2g9h | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2006-07-11 | ARG | B:71 | B:71 | 57.0 | 0.253 | H | -64.7 | -33.6 | 4.0 | 0.018 | 0.235 |
C:P04664:0.236 |
HOH |
3.341 |
NH1 |
O |
|
2iam | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-04-03 | ARG | B:71 | B:71 | 46.0 | 0.204 | H | -51.4 | -33.0 | 0.0 | 0.0 | 0.204 |
E:P01850:0.049 C:P60174:0.204 |
HOH |
7.703 |
N |
O |
|
2ian | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-04-03 | ARG | B:71 | B:71 | 45.0 | 0.2 | H | -56.3 | -39.7 | 0.0 | 0.0 | 0.2 |
E:P01850:0.058 C:P60174:0.2 |
HOH |
9.180 |
NH1 |
O |
|
ARG | G:71 | G:71 | 45.0 | 0.2 | H | -65.2 | -40.8 | NA | NA | NA | |||||||||||||
ARG | L:71 | L:71 | 40.0 | 0.178 | H | -71.3 | -40.3 | NA | NA | NA | |||||||||||||
ARG | Q:71 | Q:71 | 44.0 | 0.196 | H | -60.6 | -49.9 | NA | NA | NA | |||||||||||||
2icw | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-03-20 | ARG | B:71 | B:71 | 54.0 | 0.24 | H | -61.2 | -48.3 | 3.0 | 0.013 | 0.227 |
C:None:0.227 |
HOH |
4.829 |
NH1 |
O |
|
ARG | E:71 | E:71 | 53.0 | 0.236 | H | -62.0 | -46.4 | NA | NA | NA | |||||||||||||
2ipk | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-03-13 | ARG | B:71 | B:71 | 51.0 | 0.227 | H | -61.1 | -37.6 | 1.0 | 0.004 | 0.223 |
C:None:0.222 |
HOH |
3.462 |
NH2 |
O |
|
2oje | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2007-01-23 | ARG | B:71 | B:71 | 50.0 | 0.222 | H | -53.1 | -44.9 | 1.0 | 0.004 | 0.218 |
C:None:0.218 |
PO4 HOH |
9.176 5.015 |
NH1 O |
O1 O |
|
ARG | F:71 | F:71 | 49.0 | 0.218 | H | -53.1 | -44.8 | NA | NA | NA | |||||||||||||
2xn9 | 5 | P04229 | 92.11 | 1e-130 |
X-RAY |
2010-11-24 | ARG | E:71 | E:71 | 56.0 | 0.249 | H | -59.1 | -49.1 | 3.0 | 0.013 | 0.236 |
F:A8CDU0:0.236 |
HOH |
3.274 |
NH1 |
O |
|
3qxa | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2011-11-16 | ARG | B:71 | B:71 | 73.0 | 0.324 | H | -64.5 | -43.5 | 16.0 | 0.071 | 0.253 |
E:P04233:0.253 |
HOH |
4.246 |
NH1 |
O |
|
ARG | D:71 | E:71 | 53.0 | 0.236 | H | -73.3 | -32.8 | NA | NA | NA | |||||||||||||
3qxd | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2011-11-16 | ARG | B:71 | B:71 | 77.0 | 0.342 | H | -69.6 | -41.6 | 25.0 | 0.111 | 0.231 |
F:P04233:0.231 |
HOH |
3.485 |
NH2 |
O |
|
ARG | D:71 | E:71 | 52.0 | 0.231 | H | -66.7 | -41.1 | NA | NA | NA | |||||||||||||
4c56 | 5 | A9JJF6 | 92.11 | 1e-130 |
X-RAY |
2014-07-23 | ARG | E:71 | E:71 | 58.0 | 0.258 | H | -70.1 | -32.7 | NA | NA | NA | ||||||
ARG | K:71 | K:71 | 57.0 | 0.253 | H | -69.5 | -33.8 | 1.0 | 0.004 | 0.249 |
L:Q03909:0.249 |
||||||||||||
4e41 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2012-08-29 | ARG | B:71 | B:71 | 41.0 | 0.182 | H | -65.6 | -40.5 | 0.0 | 0.0 | 0.182 |
C:P60174:0.182 |
HOH |
3.835 |
NH1 |
O |
|
ARG | G:71 | G:71 | 50.0 | 0.222 | H | -67.6 | -37.2 | NA | NA | NA | |||||||||||||
4ov5 | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2014-07-16 | ARG | B:71 | B:71 | 65.0 | 0.289 | H | -68.3 | -41.4 | 4.0 | 0.018 | 0.271 |
M:P01892:0.271 |
HOH |
4.860 |
N |
O |
|
ARG | D:71 | E:71 | 66.0 | 0.293 | H | -66.4 | -33.8 | NA | NA | NA | |||||||||||||
ARG | F:71 | H:71 | 65.0 | 0.289 | H | -61.8 | -41.3 | NA | NA | NA | |||||||||||||
ARG | H:71 | K:71 | 64.0 | 0.284 | H | -70.0 | -33.5 | NA | NA | NA | |||||||||||||
ARG | J:71 | N:71 | 69.0 | 0.307 | H | -65.5 | -36.7 | NA | NA | NA | |||||||||||||
ARG | L:71 | Q:71 | 53.0 | 0.236 | H | -62.5 | -38.8 | NA | NA | NA | |||||||||||||
6cqr | 2 | P04229 | 92.11 | 1e-130 |
X-RAY |
2018-06-06 | ARG | B:71 | B:71 | 61.0 | 0.271 | H | -65.5 | -32.1 | 3.0 | 0.013 | 0.258 |
E:None:0.071 C:P04591:0.222 |
HOH |
4.870 |
NH1 |
O |
|
ARG | G:71 | G:71 | 57.0 | 0.253 | H | -78.6 | -32.4 | NA | NA | NA | |||||||||||||
2wbj | 2 | P01911 | 88.44 | 1e-130 |
X-RAY |
2009-04-07 | ALA | B:71 | B:71 | 13.0 | 0.113 | H | -56.2 | -41.6 | 13.0 | 0.113 | 0.0 |
SO4 |
9.283 |
O |
O4 |
||
ALA | F:71 | F:71 | 13.0 | 0.113 | H | -60.0 | -41.4 | NA | NA | NA | |||||||||||||
1ymm | 2 | Q29790 | 88.89 | 2e-130 |
X-RAY |
2005-05-03 | ALA | B:71 | B:71 | 6.0 | 0.052 | H | -45.3 | -28.2 | 0.0 | 0.0 | 0.052 |
C:P02686:0.052 |
|||||
6cqj | 2 | P04229 | 92.06 | 6e-130 |
X-RAY |
2018-06-06 | ARG | B:70 | B:71 | 49.0 | 0.218 | H | -75.2 | -26.2 | 2.0 | 0.009 | 0.209 |
C:P04591:0.209 |
HOH |
4.011 |
NH2 |
O |
|
ARG | E:70 | E:71 | 52.0 | 0.231 | H | -60.6 | -28.3 | NA | NA | NA | |||||||||||||
ARG | H:70 | H:71 | 38.0 | 0.169 | H | -76.2 | -39.9 | NA | NA | NA | |||||||||||||
1dlh | 2 | P13758 | 92.02 | 5e-129 |
X-RAY |
1994-06-22 | ARG | B:69 | B:71 | 63.0 | 0.28 | H | -44.1 | -43.4 | 5.0 | 0.022 | 0.258 |
C:P11133:0.258 |
HOH |
4.533 |
N |
O |
|
ARG | E:69 | E:71 | 65.0 | 0.289 | H | -41.6 | -46.5 | 4.0 | 0.018 | 0.271 |
F:P11133:0.271 |
HOH |
3.282 |
NH1 |
O |
||||||||
1kg0 | 2 | P04229 | 92.02 | 5e-129 |
X-RAY |
2002-03-27 | ARG | B:69 | B:71 | 63.0 | 0.28 | H | -62.3 | -39.2 | 5.0 | 0.022 | 0.258 |
C:None:0.258 |
HOH |
2.151 |
NE |
O |
|
1d5m | 2 | P13760 | 90.1 | 6e-129 |
X-RAY |
2000-06-28 | LYS | B:71 | B:71 | 35.0 | 0.175 | H | -66.9 | -37.9 | 0.0 | 0.0 | 0.175 |
D:None:0.175 |
HOH |
2.683 |
O |
O |
|
1j8h | 2 | P13760 | 90.1 | 6e-129 |
X-RAY |
2002-03-13 | LYS | B:71 | B:71 | 33.0 | 0.165 | H | -70.2 | -36.4 | 0.0 | 0.0 | 0.165 |
D:RWHUAC:0.005 C:P03437:0.165 |
HOH |
2.706 |
O |
O |
|
1d5x | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:71 | B:71 | 35.0 | 0.175 | H | -74.6 | -31.6 | 3.0 | 0.015 | 0.16 |
D:None:0.16 |
|||||
1d5z | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:71 | B:71 | 36.0 | 0.18 | H | -58.0 | -38.5 | 0.0 | 0.0 | 0.18 |
D:None:0.18 |
HOH |
8.188 |
NZ |
O |
|
1d6e | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2000-06-28 | LYS | B:71 | B:71 | 47.0 | 0.235 | H | -65.9 | -33.7 | 3.0 | 0.015 | 0.22 |
D:None:0.22 |
HOH |
2.481 |
O |
O |
|
2seb | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
1998-01-28 | LYS | B:71 | B:71 | 34.0 | 0.17 | H | -68.5 | -35.9 | 1.0 | 0.005 | 0.165 |
D:P02458:0.165 |
HOH |
2.595 |
O |
O |
|
4is6 | 2 | P13760 | 89.58 | 2e-128 |
X-RAY |
2013-10-23 | LYS | B:71 | B:71 | 51.0 | 0.255 | H | -59.1 | -32.8 | 2.0 | 0.01 | 0.245 |
C:P40967:0.245 |
|||||
5jlz | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2016-12-07 | LYS | B:71 | B:71 | 37.0 | 0.185 | H | -66.4 | -39.2 | 12.0 | 0.06 | 0.125 |
E:K7EM90:0.125 |
HOH |
2.707 |
NZ |
O |
|
LYS | D:71 | D:71 | 34.0 | 0.17 | H | -64.6 | -40.5 | NA | NA | NA | |||||||||||||
5lax | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2016-12-07 | LYS | B:71 | B:71 | 30.0 | 0.15 | H | -68.6 | -33.6 | 10.0 | 0.05 | 0.1 |
E:None:0.1 |
HOH |
3.947 |
NZ |
O |
|
LYS | D:71 | D:71 | 28.0 | 0.14 | H | -67.5 | -34.7 | NA | NA | NA | |||||||||||||
5ni9 | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2018-06-13 | LYS | B:71 | B:71 | 37.0 | 0.185 | H | -66.3 | -38.8 | 7.0 | 0.035 | 0.15 |
C:P06733:0.15 |
URE HOH |
8.965 2.668 |
O O |
N2 O |
|
5nig | 2 | P13760 | 89.58 | 3e-128 |
X-RAY |
2018-06-13 | LYS | B:71 | B:71 | 29.0 | 0.145 | H | -68.3 | -35.4 | 6.0 | 0.03 | 0.115 |
C:P06733:0.115 |
URE HOH |
8.894 2.676 |
O O |
O O |
|
4mcy | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-11-27 | LYS | B:73 | B:71 | 41.0 | 0.205 | H | -67.1 | -36.5 | 9.0 | 0.045 | 0.16 |
C:P08670:0.16 |
EDO HOH |
6.766 2.711 |
N O |
O1 O |
|
4mcz | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:73 | B:71 | 40.0 | 0.2 | H | -66.5 | -36.9 | 11.0 | 0.055 | 0.145 |
C:P08670:0.145 |
HOH |
2.832 |
O |
O |
|
4md0 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:73 | B:71 | 40.0 | 0.2 | H | -66.9 | -36.5 | 10.0 | 0.05 | 0.15 |
C:P08670:0.15 |
HOH |
2.697 |
O |
O |
|
4md4 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2013-12-04 | LYS | B:73 | B:71 | 39.0 | 0.195 | H | -73.4 | -38.7 | 13.0 | 0.065 | 0.13 |
C:P16112:0.13 |
HOH |
2.782 |
O |
O |
|
4y19 | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2015-09-23 | LYS | B:73 | B:71 | 51.0 | 0.255 | H | -68.2 | -39.0 | 5.0 | 0.025 | 0.23 |
C:P01308:0.23 |
MLI HOH |
9.740 2.680 |
O O |
O8 O |
|
4y1a | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2015-09-23 | LYS | B:73 | B:71 | 51.0 | 0.255 | S | -77.1 | -30.5 | 5.0 | 0.025 | 0.23 |
C:P01308:0.23 |
|||||
6bil | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | B:73 | B:71 | 39.0 | 0.195 | H | -75.0 | -34.5 | 10.0 | 0.05 | 0.145 |
C:None:0.145 |
HOH |
2.683 |
O |
O |
|
6bin | 3 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | C:73 | B:71 | 35.0 | 0.175 | H | -73.5 | -31.4 | 2.0 | 0.01 | 0.165 |
B:None:0.165 |
HOH |
2.665 |
O |
O |
|
6biv | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2018-01-17 | LYS | B:73 | A:71 | 37.0 | 0.185 | H | -77.1 | -24.1 | 8.0 | 0.04 | 0.145 |
C:None:0.145 |
HOH |
9.328 |
CB |
O |
|
6nix | 2 | P13760 | 89.53 | 2e-127 |
X-RAY |
2020-01-22 | LYS | B:73 | B:71 | 41.0 | 0.205 | H | -73.3 | -30.3 | 4.0 | 0.02 | 0.185 |
C:None:0.185 |
HOH |
2.829 |
O |
O |
|
6v0y | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 36.0 | 0.18 | H | -68.2 | -33.1 | 12.0 | 0.06 | 0.12 |
E:None:0.025 C:None:0.115 |
GOL HOH |
6.104 5.902 |
N C |
C2 O |
|
6v13 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 34.0 | 0.17 | H | -82.5 | -34.4 | 12.0 | 0.06 | 0.11 |
E:None:0.02 C:None:0.105 |
GOL HOH |
7.077 5.151 |
O O |
O1 O |
|
6v15 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 38.0 | 0.19 | H | -71.1 | -33.4 | 12.0 | 0.06 | 0.13 |
E:None:0.015 C:None:0.125 |
HOH |
6.650 |
N |
O |
|
6v18 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 30.0 | 0.15 | H | -69.0 | -38.6 | 10.0 | 0.05 | 0.1 |
E:None:0.01 C:None:0.1 |
GOL HOH |
6.329 2.703 |
N NZ |
C3 O |
|
6v19 | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 35.0 | 0.175 | H | -70.7 | -31.4 | 11.0 | 0.055 | 0.12 |
E:None:0.02 C:None:0.115 |
GOL HOH |
6.341 5.769 |
N C |
C1 O |
|
6v1a | 2 | P13760 | 90.0 | 3e-127 |
X-RAY |
2020-11-25 | LYS | B:71 | B:71 | 34.0 | 0.17 | H | -70.2 | -26.8 | 12.0 | 0.06 | 0.11 |
E:None:0.025 C:None:0.1 |
GOL GOL GOL HOH |
8.927 6.081 8.940 2.631 |
N N NZ NZ |
O1 C3 O1 O |
|
6bir | 2 | P79552 | 89.53 | 6e-127 |
X-RAY |
2018-01-17 | ARG | B:73 | B:71 | 64.0 | 0.284 | H | -64.8 | -31.7 | 16.0 | 0.071 | 0.213 |
C:None:0.213 |
HOH |
2.663 |
O |
O |
|
3o6f | 2 | P13760 | 89.53 | 8e-127 |
X-RAY |
2011-03-02 | LYS | B:100 | B:100 | 3.0 | 0.015 | H | -63.1 | -27.4 | 3.0 | 0.015 | 0.0 |
HOH |
4.467 |
CE |
O |
||
LYS | F:100 | F:100 | 3.0 | 0.015 | H | -72.6 | -22.4 | NA | NA | NA | |||||||||||||
3t0e | 2 | P13760 | 89.53 | 8e-127 |
X-RAY |
2012-03-07 | LYS | B:100 | B:100 | 2.0 | 0.01 | H | -54.2 | -29.5 | 2.0 | 0.01 | 0.0 | ||||||
6bij | 2 | P13760 | 89.95 | 9e-127 |
X-RAY |
2018-01-17 | LYS | B:70 | B:71 | 42.0 | 0.21 | H | -71.6 | -31.7 | 14.0 | 0.07 | 0.14 |
C:None:0.14 |
HOH |
2.707 |
O |
O |
|
4mdi | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | GLU | B:73 | B:71 | 23.0 | 0.121 | H | -64.3 | -42.4 | 15.0 | 0.079 | 0.042 |
C:P08670:0.042 |
EDO HOH |
6.514 2.815 |
N O |
O2 O |
|
4mdj | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | GLU | B:73 | B:71 | 22.0 | 0.116 | H | -71.0 | -41.1 | 1.0 | 0.005 | 0.111 |
C:P08670:0.111 |
EDO HOH |
7.257 2.564 |
N OE1 |
O1 O |
|
6cpo | 2 | D7RIH9 | 89.47 | 1e-126 |
X-RAY |
2018-06-06 | ALA | B:71 | B:71 | 9.0 | 0.078 | H | -69.5 | -39.7 | 7.0 | 0.061 | 0.017 |
C:P04591:0.017 |
HOH |
2.706 |
O |
O |
|
ALA | E:71 | E:71 | 11.0 | 0.096 | H | -69.2 | -39.6 | NA | NA | NA | |||||||||||||
6cqq | 2 | D7RIH9 | 89.47 | 1e-126 |
X-RAY |
2018-06-06 | ALA | B:71 | B:71 | 1.0 | 0.009 | H | -70.8 | -51.8 | 0.0 | 0.0 | 0.009 |
C:P04591:0.009 |
MG HOH |
6.659 5.365 |
CB O |
MG O |
|
ALA | G:71 | G:71 | 10.0 | 0.087 | H | -70.4 | -51.6 | NA | NA | NA | |||||||||||||
4md5 | 2 | P13760 | 89.53 | 1e-126 |
X-RAY |
2013-12-04 | ARG | B:73 | B:71 | 64.0 | 0.284 | H | -66.5 | -36.4 | 19.0 | 0.084 | 0.2 |
C:P08670:0.2 |
HOH |
2.775 |
O |
O |
|
6bix | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | ARG | B:73 | B:71 | 65.0 | 0.289 | H | -69.1 | -36.1 | 18.0 | 0.08 | 0.209 |
C:None:0.209 |
HOH |
2.706 |
O |
O |
|
6biy | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | ARG | B:73 | B:71 | 77.0 | 0.342 | H | -67.0 | -38.8 | 8.0 | 0.036 | 0.306 |
C:None:0.307 |
B3P HOH |
7.390 2.764 |
O O |
O6 O |
|
6biz | 2 | Q29890 | 89.53 | 1e-126 |
X-RAY |
2018-01-17 | ARG | B:73 | B:71 | 76.0 | 0.338 | H | -68.9 | -36.6 | 9.0 | 0.04 | 0.298 |
C:None:0.298 |
B3P HOH |
7.234 2.670 |
O O |
O6 O |
|
6cpl | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | ARG | B:71 | B:71 | 44.0 | 0.196 | H | -70.7 | -35.2 | 3.0 | 0.013 | 0.183 |
C:P04591:0.182 |
SO4 HOH |
8.869 2.799 |
O O |
O4 O |
|
6cpn | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | ARG | B:71 | B:71 | 59.0 | 0.262 | H | -62.0 | -39.1 | 5.0 | 0.022 | 0.24 |
C:P04591:0.24 |
SO4 HOH |
9.578 2.850 |
O O |
O1 O |
|
6cql | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | ARG | B:71 | B:71 | 42.0 | 0.187 | H | -75.7 | -38.6 | 1.0 | 0.004 | 0.183 |
C:P04591:0.178 |
HOH |
2.724 |
O |
O |
|
6cqn | 2 | P20039 | 89.47 | 2e-126 |
X-RAY |
2018-06-06 | ARG | B:71 | B:71 | 42.0 | 0.187 | H | -65.0 | -41.1 | 1.0 | 0.004 | 0.183 |
A:P01903:0.004 E:None:0.018 C:P04591:0.182 |
HOH |
2.565 |
O |
O |
|
6atf | 2 | A0A0A1I7H6 | 88.48 | 2e-126 |
X-RAY |
2017-09-13 | ARG | B:73 | B:71 | 61.0 | 0.271 | H | -71.4 | -37.9 | 15.0 | 0.067 | 0.204 |
E:None:0.204 |
EDO PGE HOH |
2.915 8.656 2.841 |
NH1 O O |
O1 O1 O |
|
ARG | D:73 | E:71 | 61.0 | 0.271 | H | -71.9 | -37.5 | NA | NA | NA | |||||||||||||
6ati | 2 | A0A0A1I7H6 | 88.48 | 2e-126 |
X-RAY |
2017-09-13 | ARG | B:73 | B:71 | 58.0 | 0.258 | H | -68.9 | -33.4 | 22.0 | 0.098 | 0.16 |
E:None:0.16 |
HOH |
2.735 |
O |
O |
|
ARG | D:73 | E:71 | 62.0 | 0.276 | H | -67.9 | -34.0 | NA | NA | NA | |||||||||||||
5v4m | 2 | P01911 | 88.48 | 2e-125 |
X-RAY |
2017-05-03 | ALA | B:97 | F:318 | 0.0 | 0.0 | H | -64.4 | -44.9 | 0.0 | 0.0 | 0.0 |
HOH |
2.650 |
O |
O |
||
ALA | D:97 | C:318 | 0.0 | 0.0 | H | -64.2 | -44.6 | NA | NA | NA | |||||||||||||
ALA | F:97 | I:318 | 0.0 | 0.0 | H | -63.6 | -43.9 | NA | NA | NA | |||||||||||||
ALA | H:97 | L:318 | 0.0 | 0.0 | H | -63.4 | -43.7 | NA | NA | NA | |||||||||||||
1bx2 | 2 | P04229 | 88.48 | 5e-125 |
X-RAY |
1998-10-21 | ALA | B:69 | B:71 | 8.0 | 0.07 | H | -69.5 | -40.2 | 1.0 | 0.009 | 0.061 |
C:None:0.061 |
|||||
ALA | E:69 | E:71 | 3.0 | 0.026 | H | -70.2 | -36.6 | 0.0 | 0.0 | 0.026 |
F:None:0.026 |
HOH |
2.577 |
O |
O |
||||||||
6atz | 2 | A0A0A1I7H6 | 88.83 | 7e-125 |
X-RAY |
2017-09-20 | ARG | B:69 | B:71 | 69.0 | 0.307 | H | -71.7 | -35.6 | 17.0 | 0.076 | 0.231 |
E:None:0.231 |
HOH |
3.971 |
HH22 |
O |
|
ARG | D:69 | D:71 | 64.0 | 0.284 | H | -72.3 | -35.8 | NA | NA | NA | |||||||||||||
2q6w | 2 | P79483 | 86.84 | 7e-121 |
X-RAY |
2007-07-24 | LYS | B:71 | B:71 | 20.0 | 0.1 | G | -51.2 | -42.9 | 1.0 | 0.005 | 0.095 |
C:P05106:0.095 |
HOH |
2.757 |
O |
O |
|
LYS | E:71 | E:71 | 18.0 | 0.09 | H | -62.1 | -31.7 | NA | NA | NA | |||||||||||||
2fse | 2 | P04229 | 84.49 | 6e-120 |
X-RAY |
2006-09-19 | ARG | B:68 | B:71 | 52.0 | 0.231 | H | -63.0 | -49.7 | 4.0 | 0.018 | 0.213 |
E:P02458:0.213 |
HOH |
4.413 |
NH2 |
O |
|
ARG | D:68 | D:71 | 31.0 | 0.138 | H | -77.8 | -55.3 | NA | NA | NA | |||||||||||||
3c5j | 2 | Q6YJU6 | 85.79 | 2e-119 |
X-RAY |
2008-08-05 | LYS | B:71 | B:71 | 27.0 | 0.135 | H | -64.5 | -34.2 | 1.0 | 0.005 | 0.13 |
C:Q05639:0.13 |
HOH |
2.746 |
O |
O |
|
7n19 | 2 | Q5Y7D1 | 85.03 | 1e-118 |
X-RAY |
2021-08-18 | LYS | B:68 | B:71 | 26.0 | 0.13 | H | -74.3 | -24.7 | 1.0 | 0.005 | 0.125 |
C:None:0.125 |
EDO EDO HOH |
9.599 8.237 2.797 |
O NZ O |
C2 C2 O |
|
LYS | E:68 | E:71 | 26.0 | 0.13 | H | -71.9 | -23.4 | NA | NA | NA | |||||||||||||
LYS | H:68 | H:71 | 28.0 | 0.14 | H | -73.2 | -25.1 | NA | NA | NA | |||||||||||||
LYS | K:68 | K:71 | 25.0 | 0.125 | H | -73.4 | -26.4 | NA | NA | NA | |||||||||||||
4h25 | 2 | B8YAC7 | 86.17 | 2e-118 |
X-RAY |
2013-10-16 | LYS | B:69 | B:71 | 40.0 | 0.2 | H | -66.4 | -33.8 | 12.0 | 0.06 | 0.14 |
C:None:0.14 |
IPA HOH |
7.168 2.714 |
N O |
O2 O |
|
LYS | E:69 | E:71 | 27.0 | 0.135 | H | -64.4 | -37.4 | NA | NA | NA | |||||||||||||
4h26 | 2 | B8YAC7 | 86.17 | 2e-118 |
X-RAY |
2013-10-16 | LYS | B:69 | B:71 | 27.0 | 0.135 | H | -67.0 | -27.5 | 1.0 | 0.005 | 0.13 |
C:None:0.13 |
HOH |
3.098 |
NZ |
O |
|
LYS | E:69 | E:71 | 26.0 | 0.13 | H | -64.5 | -26.7 | NA | NA | NA | |||||||||||||
1a6a | 2 | P01912 | 84.49 | 5e-118 |
X-RAY |
1998-05-27 | LYS | B:67 | B:71 | 18.0 | 0.09 | H | -75.9 | -32.4 | 0.0 | 0.0 | 0.09 |
C:P04233:0.09 |
HOH |
5.546 |
CE |
O |
|
4h1l | 2 | D0AB36 | 85.56 | 6e-117 |
X-RAY |
2012-11-14 | LYS | B:68 | B:71 | 53.0 | 0.265 | H | -60.3 | -33.1 | 3.0 | 0.015 | 0.25 |
J:None:0.155 C:None:0.2 |
|||||
LYS | E:68 | E:71 | 55.0 | 0.275 | H | -59.7 | -33.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q30154-f1 | 1 | Q30154 | 100.0 | 0.0 | ARG | A:100 | A:100 | 34.0 | 0.151 | H | -70.1 | -35.2 | |
af-p01911-f1 | 1 | P01911 | 88.72 | 7e-168 | ALA | A:100 | A:100 | 10.0 | 0.087 | H | -65.0 | -40.1 | |
af-p13762-f1 | 1 | P13762 | 86.09 | 2e-162 | ARG | A:100 | A:100 | 42.0 | 0.187 | H | -65.4 | -35.0 | |
af-p79483-f1 | 1 | P79483 | 86.84 | 2e-162 | LYS | A:100 | A:100 | 13.0 | 0.065 | H | -70.2 | -38.2 |