Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42931162 . G A CCDS4876.1:NM_018960.4:c.691Ggc>Agc_NP_061833.1:p.231G>S Homo sapiens glycine N-methyltransferase (GNMT), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2azt 1 Q14749 99.66 0.0 X-RAY
2006-09-26 GLY A:231 NA:NA DO NA DO DO DO NA NA NA
GLY B:231 NA:NA DO NA DO DO DO NA NA NA
1r74 1 Q14749 100.0 0.0 X-RAY
2004-09-21 GLY A:230 NA:NA DO NA DO DO DO NA NA NA
GLY B:230 NA:NA DO NA DO DO DO NA NA NA
1bhj 1 P13255 92.15 0.0 X-RAY
1999-01-06 GLY A:228 A:228 33.0 0.44 S -124.1 -161.8 33.0 0.44 0.0 HOH
6.405
N
O
GLY B:228 B:228 24.0 0.32 S -124.0 179.1 24.0 0.32 0.0 HOH
4.345
CA
O
1d2c 1 P13255 92.15 0.0 X-RAY
1999-10-06 GLY A:228 A:228 27.0 0.36 S -102.2 -158.2 27.0 0.36 0.0 HOH
3.598
O
O
GLY B:228 B:228 35.0 0.467 S -110.4 -161.7 35.0 0.467 0.0
1kia 1 P13255 92.15 0.0 X-RAY
2003-06-10 GLY A:228 A:228 41.0 0.547 S 155.9 146.8 41.0 0.547 0.0 HOH
8.734
O
O
GLY B:228 B:228 41.0 0.547 S 155.3 147.4 41.0 0.547 0.0 HOH
9.868
N
O
GLY C:228 C:228 42.0 0.56 S 155.5 145.7 42.0 0.56 0.0
GLY D:228 D:228 39.0 0.52 S 156.2 146.1 39.0 0.52 0.0 HOH
4.672
O
O
1nbh 1 P13255 92.15 0.0 X-RAY
2003-03-04 GLY A:228 A:228 44.0 0.587 S 144.1 139.9 44.0 0.587 0.0 HOH
8.814
O
O
GLY B:228 B:228 44.0 0.587 S 144.4 139.7 44.0 0.587 0.0 HOH
7.563
CA
O
GLY C:228 C:228 42.0 0.56 S 144.8 140.1 42.0 0.56 0.0 HOH
4.620
O
O
GLY D:228 D:228 44.0 0.587 S 143.9 139.5 44.0 0.587 0.0 HOH
7.094
N
O
1xva 1 P13255 92.15 0.0 X-RAY
1997-01-27 GLY A:228 A:228 22.0 0.293 S -88.8 -156.3 22.0 0.293 0.0 HOH
8.850
C
O
GLY B:228 B:228 40.0 0.533 S -117.8 -151.0 40.0 0.533 0.0
2idj 1 P13255 92.15 0.0 X-RAY
2006-12-19 GLY A:228 NA:NA DO NA DO DO DO NA NA NA
GLY B:228 NA:NA DO NA DO DO DO NA NA NA
GLY C:228 NA:NA DO NA DO DO DO NA NA NA
GLY D:228 NA:NA DO NA DO DO DO NA NA NA
2idk 1 P13255 92.15 0.0 X-RAY
2006-12-19 GLY A:228 NA:NA DO NA DO DO DO NA NA NA
GLY B:228 NA:NA DO NA DO DO DO NA NA NA
GLY C:228 NA:NA DO NA DO DO DO NA NA NA
GLY D:228 NA:NA DO NA DO DO DO NA NA NA
3thr 1 P13255 92.15 0.0 X-RAY
2011-11-16 GLY A:229 NA:NA DO NA DO DO DO NA NA NA
GLY B:229 NA:NA DO NA DO DO DO NA NA NA
GLY C:229 NA:NA DO NA DO DO DO NA NA NA
GLY D:229 NA:NA DO NA DO DO DO NA NA NA
3ths 1 P13255 92.15 0.0 X-RAY
2011-11-16 GLY A:229 NA:NA DO NA DO DO DO NA NA NA
GLY B:229 NA:NA DO NA DO DO DO NA NA NA
GLY C:229 NA:NA DO NA DO DO DO NA NA NA
GLY D:229 NA:NA DO NA DO DO DO NA NA NA
1d2g 1 P13255 91.81 0.0 X-RAY
1999-10-25 GLY A:228 A:228 26.0 0.347 S -74.7 -163.8 26.0 0.347 0.0 HOH
5.053
CA
O
GLY B:228 B:228 30.0 0.4 S -85.1 -161.7 30.0 0.4 0.0 HOH
3.457
O
O
1d2h 1 P13255 91.81 0.0 X-RAY
1999-10-25 GLY A:228 A:228 40.0 0.533 S -73.7 -125.6 40.0 0.533 0.0 HOH
3.776
CA
O
GLY B:228 B:228 33.0 0.44 S -126.0 -115.1 33.0 0.44 0.0 HOH
3.519
O
O
GLY C:228 C:228 40.0 0.533 S -163.2 -172.7 40.0 0.533 0.0 HOH
4.252
CA
O
GLY D:228 D:228 25.0 0.333 S -105.1 -168.8 25.0 0.333 0.0 HOH
6.721
C
O
1nbi 1 P13255 91.81 0.0 X-RAY
2003-03-04 GLY A:228 A:228 72.0 0.96 S 105.5 -125.8 72.0 0.96 0.0 HOH
9.102
O
O
GLY B:228 B:228 72.0 0.96 S 105.3 -124.9 72.0 0.96 0.0
GLY C:228 C:228 58.0 0.773 S 112.2 -160.1 58.0 0.773 0.0 HOH
3.525
N
O
GLY D:228 D:228 58.0 0.773 S 111.4 -160.6 58.0 0.773 0.0 HOH
5.599
O
O
1r8x 1 Q9QXF8 91.5 0.0 X-RAY
2004-09-21 GLY A:228 NA:NA DO NA DO DO DO NA NA NA
GLY B:228 NA:NA DO NA DO DO DO NA NA NA
1r8y 1 Q9QXF8 91.5 0.0 X-RAY
2004-09-21 GLY A:228 NA:NA DO NA DO DO DO NA NA NA
GLY B:228 NA:NA DO NA DO DO DO NA NA NA
GLY C:228 NA:NA DO NA DO DO DO NA NA NA
GLY D:228 NA:NA DO NA DO DO DO NA NA NA
GLY E:228 NA:NA DO NA DO DO DO NA NA NA
GLY F:228 NA:NA DO NA DO DO DO NA NA NA
GLY G:228 NA:NA DO NA DO DO DO NA NA NA
GLY H:228 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14749-f1 1 Q14749 100.0 0.0 GLY A:231 A:231 18.0 0.24 S -79.5 153.2