Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42974774 . A C CCDS4878.1:NM_006245.3:c.448Aac>Cac_NP_006236.1:p.150N>H Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
pdb_id: 
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auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 SER B:74 B:64 37.0 0.322 H -43.2 -29.2 NA NA NA
SER E:74 E:64 37.0 0.322 H -47.4 -25.4 37.0 0.322 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 SER B:45 B:74 39.0 0.339 H -75.2 -44.1 39.0 0.339 0.0
SER E:45 E:74 45.0 0.391 H -85.8 -27.2 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 SER B:41 B:64 32.0 0.278 H -57.7 -52.0 32.0 0.278 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 SER B:37 B:64 25.0 0.217 H -45.2 -22.0 25.0 0.217 0.0
SER E:37 E:64 25.0 0.217 H -44.8 -26.9 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 SER B:37 B:64 30.0 0.261 H -60.3 0.6 30.0 0.261 0.0
SER E:37 E:64 33.0 0.287 H -55.9 -7.9 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 SER A:46 A:74 40.0 0.348 H -67.1 -39.7 40.0 0.348 0.0 HOH
 3.890
 CB
 O
SER B:46 B:74 38.0 0.33 H -58.5 -46.3 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 SER B:64 AAA:74 46.0 0.4 H -56.7 -45.1 46.0 0.4 0.0 HOH
 6.351
 C
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 SER A:86 A:74 52.0 0.452 H -54.7 -36.0 52.0 0.452 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 SER A:49 A:74 31.0 0.27 H -58.9 -40.1 31.0 0.27 0.0 HOH
 7.828
 N
 O
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 SER A:49 A:74 33.0 0.287 H -63.0 -37.8 33.0 0.287 0.0 HOH
 7.710
 N
 O
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 SER A:49 A:74 32.0 0.278 H -57.0 -43.8 32.0 0.278 0.0
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 SER A:49 A:74 34.0 0.296 H -57.3 -49.3 34.0 0.296 0.0 HOH
 8.379
 N
 O
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 SER A:49 A:74 55.0 0.478 H -61.5 -34.3 55.0 0.478 0.0 HOH
 3.979
 O
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 SER C:391 F:74 46.0 0.4 H -63.5 -48.4 46.0 0.4 0.0
SER H:391 C:74 49.0 0.426 H -63.5 -48.4 49.0 0.426 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 SER C:391 F:74 61.0 0.53 H -62.7 -43.0 60.0 0.522 0.008 B:Q4QY51:0.009
SER H:391 C:74 61.0 0.53 H -62.6 -43.1 61.0 0.53 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 SER C:391 F:74 43.0 0.374 H -63.1 -41.7 43.0 0.374 0.0
SER H:391 C:74 43.0 0.374 H -63.0 -41.7 43.0 0.374 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 SER C:391 C:74 48.0 0.417 H -62.9 -45.5 48.0 0.417 0.0
SER H:391 F:74 47.0 0.409 H -63.0 -45.5 47.0 0.409 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 SER E:45 E:74 60.0 0.522 H -57.5 -49.2 60.0 0.522 0.0
SER F:45 F:74 63.0 0.548 H -57.4 -49.2 63.0 0.548 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 ASN A:150 A:150 59.0 0.369 H -60.7 -43.9
af-q13362-f1 1 Q13362 81.45 0.0 SER A:74 A:74 41.0 0.357 H -58.8 -44.8