Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42975031 . G A CCDS4878.1:NM_006245.3:c.620tGg>tAg_NP_006236.1:p.207W>* Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 TRP B:131 B:121 17.0 0.067 H -59.8 -43.0 NA NA NA
TRP E:131 E:121 15.0 0.059 H -61.2 -44.9 15.0 0.059 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 TRP B:102 B:131 21.0 0.082 H -65.6 -37.8 21.0 0.082 0.0
TRP E:102 E:131 26.0 0.102 H -83.1 -29.7 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 TRP B:98 B:121 10.0 0.039 H -59.4 -33.5 10.0 0.039 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 TRP B:94 B:121 14.0 0.055 H -67.8 -57.1 14.0 0.055 0.0
TRP E:94 E:121 13.0 0.051 H -65.9 -57.4 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 TRP B:94 B:121 15.0 0.059 H -78.9 -54.7 15.0 0.059 0.0
TRP E:94 E:121 13.0 0.051 H -78.3 -56.1 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 TRP A:103 A:131 16.0 0.063 H -52.8 -37.8 16.0 0.063 0.0 HOH
 3.700
 CB
 O
TRP B:103 B:131 13.0 0.051 H -56.7 -34.7 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 TRP B:121 AAA:131 22.0 0.086 H -46.1 -44.1 22.0 0.086 0.0 HOH
 6.196
 N
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 TRP A:143 A:131 18.0 0.071 H -58.4 -38.6 18.0 0.071 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 TRP A:106 A:131 11.0 0.043 H -66.8 -37.3 11.0 0.043 0.0
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 TRP A:106 A:131 10.0 0.039 H -62.0 -36.7 10.0 0.039 0.0
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 TRP A:106 A:131 9.0 0.035 H -70.5 -38.3 9.0 0.035 0.0 HOH
 8.695
 CZ2
 O
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 TRP A:106 A:131 13.0 0.051 H -63.8 -35.6 13.0 0.051 0.0 HOH
 8.489
 CZ2
 O
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 TRP A:106 A:131 9.0 0.035 H -70.2 -44.1 9.0 0.035 0.0 HOH
 9.470
 CH2
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 TRP C:448 F:131 36.0 0.141 H -61.3 -34.3 36.0 0.141 0.0
TRP H:448 C:131 34.0 0.133 H -61.3 -34.2 34.0 0.133 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 TRP C:448 F:131 39.0 0.153 H -60.4 -32.8 39.0 0.153 0.0
TRP H:448 C:131 40.0 0.157 H -60.4 -32.8 40.0 0.157 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 TRP C:448 F:131 29.0 0.114 H -57.1 -41.1 29.0 0.114 0.0
TRP H:448 C:131 28.0 0.11 H -57.1 -41.1 28.0 0.11 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 TRP C:448 C:131 26.0 0.102 H -71.9 -34.3 26.0 0.102 0.0
TRP H:448 F:131 28.0 0.11 H -71.8 -34.4 28.0 0.11 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 TRP E:102 E:131 14.0 0.055 H -50.7 -49.7 14.0 0.055 0.0
TRP F:102 F:131 13.0 0.051 H -50.8 -49.7 13.0 0.051 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 TRP A:207 A:207 18.0 0.071 H -46.9 -39.8
af-q13362-f1 1 Q13362 81.45 0.0 TRP A:131 A:131 18.0 0.071 H -48.4 -39.7