Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42975038 . T A CCDS4878.1:NM_006245.3:c.627caT>caA_NP_006236.1:p.209H>Q Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 HIS B:133 B:123 45.0 0.231 H -52.9 -52.5 NA NA NA
HIS E:133 E:123 44.0 0.226 H -54.5 -51.8 44.0 0.226 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 HIS B:104 B:133 21.0 0.108 H -96.3 -42.6 21.0 0.108 0.0
HIS E:104 E:133 21.0 0.108 H -82.5 -59.0 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 HIS B:100 B:123 4.0 0.021 H -86.9 -41.8 4.0 0.021 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 HIS B:96 B:123 42.0 0.215 H -85.9 -65.4 42.0 0.215 0.0
HIS E:96 E:123 42.0 0.215 H -97.3 -52.6 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 HIS B:96 B:123 40.0 0.205 H -90.9 -56.8 40.0 0.205 0.0
HIS E:96 E:123 38.0 0.195 H -93.9 -51.9 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 HIS A:105 A:133 6.0 0.031 H -96.5 -45.6 6.0 0.031 0.0 HOH
 2.880
 ND1
 O
HIS B:105 B:133 6.0 0.031 H -92.9 -47.2 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 HIS B:123 AAA:133 6.0 0.031 H -85.3 -56.6 6.0 0.031 0.0 HOH
 7.628
 CE1
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 HIS A:145 A:133 4.0 0.021 H -96.8 -45.1 4.0 0.021 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 HIS A:108 A:133 29.0 0.149 H -84.1 -45.1 29.0 0.149 0.0
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 HIS A:108 A:133 35.0 0.179 H -73.9 -42.5 35.0 0.179 0.0
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 HIS A:108 A:133 34.0 0.174 H -76.3 -50.1 34.0 0.174 0.0
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 HIS A:108 A:133 27.0 0.138 H -73.2 -46.9 27.0 0.138 0.0
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 HIS A:108 A:133 20.0 0.103 H -77.7 -43.0 20.0 0.103 0.0 HOH
 2.791
 NE2
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 HIS C:450 F:133 9.0 0.046 H -63.6 -40.1 9.0 0.046 0.0
HIS H:450 C:133 10.0 0.051 H -63.6 -40.1 10.0 0.051 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 HIS C:450 F:133 7.0 0.036 H -64.8 -31.2 7.0 0.036 0.0
HIS H:450 C:133 7.0 0.036 H -64.8 -31.2 7.0 0.036 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 HIS C:450 F:133 8.0 0.041 H -62.4 -41.4 8.0 0.041 0.0
HIS H:450 C:133 8.0 0.041 H -62.5 -41.5 8.0 0.041 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 HIS C:450 C:133 6.0 0.031 H -63.1 -38.3 6.0 0.031 0.0
HIS H:450 F:133 5.0 0.026 H -63.1 -38.3 5.0 0.026 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 HIS E:104 E:133 68.0 0.349 H -92.7 -52.3 68.0 0.349 0.0
HIS F:104 F:133 69.0 0.354 H -92.7 -52.2 69.0 0.354 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 HIS A:209 A:209 7.0 0.036 H -96.2 -47.0
af-q13362-f1 1 Q13362 81.45 0.0 HIS A:133 A:133 6.0 0.031 H -89.9 -47.0