Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42975167 . T A CCDS4878.1:NM_006245.3:c.649Ttc>Atc_NP_006236.1:p.217F>I Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 PHE B:141 B:131 10.0 0.048 H -39.4 -38.7 NA NA NA
PHE E:141 E:131 8.0 0.038 H -40.4 -40.3 8.0 0.038 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 PHE B:112 B:141 0.0 0.0 H -53.3 -34.3 0.0 0.0 0.0
PHE E:112 E:141 0.0 0.0 H -62.0 -26.1 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 PHE B:108 B:131 2.0 0.01 H -57.3 -22.9 2.0 0.01 0.0
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 PHE B:104 B:131 13.0 0.062 H -52.2 -16.1 13.0 0.062 0.0
PHE E:104 E:131 12.0 0.057 H -58.7 -4.3 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 PHE B:104 B:131 11.0 0.052 H -52.7 -28.3 11.0 0.052 0.0
PHE E:104 E:131 10.0 0.048 H -54.7 -32.5 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 PHE A:113 A:141 1.0 0.005 H -64.4 -38.7 1.0 0.005 0.0 HOH
 3.404
 CD2
 O
PHE B:113 B:141 2.0 0.01 H -60.2 -39.8 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 PHE B:131 AAA:141 1.0 0.005 T -65.7 -7.2 1.0 0.005 0.0 HOH
 9.041
 O
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 PHE A:153 A:141 1.0 0.005 H -52.0 -38.5 1.0 0.005 0.0
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 PHE A:116 A:141 1.0 0.005 H -68.9 -30.9 1.0 0.005 0.0
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 PHE A:116 A:141 1.0 0.005 H -66.1 -25.9 1.0 0.005 0.0 HOH
 9.718
 O
 O
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 PHE A:116 A:141 0.0 0.0 H -65.3 -31.9 0.0 0.0 0.0 HOH
 9.807
 O
 O
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 PHE A:116 A:141 2.0 0.01 H -62.5 -36.2 2.0 0.01 0.0 HOH
 8.025
 C
 O
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 PHE A:116 A:141 1.0 0.005 H -67.5 -32.8 1.0 0.005 0.0 HOH
 8.583
 C
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 PHE C:458 F:141 1.0 0.005 H -65.2 -41.1 1.0 0.005 0.0
PHE H:458 C:141 2.0 0.01 H -65.2 -41.1 2.0 0.01 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 PHE C:458 F:141 7.0 0.033 H -64.2 -39.3 7.0 0.033 0.0
PHE H:458 C:141 9.0 0.043 H -64.2 -39.2 9.0 0.043 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 PHE C:458 F:141 9.0 0.043 H -64.7 -40.6 9.0 0.043 0.0
PHE H:458 C:141 9.0 0.043 H -64.7 -40.5 9.0 0.043 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 PHE C:458 C:141 3.0 0.014 H -65.1 -38.7 3.0 0.014 0.0
PHE H:458 F:141 3.0 0.014 H -65.2 -38.7 3.0 0.014 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 PHE E:112 E:141 28.0 0.133 H -76.6 -40.4 28.0 0.133 0.0
PHE F:112 F:141 23.0 0.11 H -76.5 -40.4 23.0 0.11 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 PHE A:217 A:217 0.0 0.0 H -69.7 -32.4
af-q13362-f1 1 Q13362 81.45 0.0 PHE A:141 A:141 1.0 0.005 H -67.2 -36.2