Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr6 42975698 . A C CCDS4878.1:NM_006245.3:c.752gAt>gCt_NP_006236.1:p.251D>A Homo sapiens protein phosphatase 2 regulatory subunit B'delta (PPP2R5D), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 87.89 0.0 X-RAY
 2006-12-12 ASP B:175 B:165 53.0 0.353 T -23.2 153.9 NA NA NA
ASP E:175 E:165 54.0 0.36 T -25.1 156.9 54.0 0.36 0.0
2iae 2 Q13362 88.21 0.0 X-RAY
 2006-12-26 ASP B:146 B:175 1.0 0.007 -92.1 114.2 1.0 0.007 0.0
ASP E:146 E:175 1.0 0.007 -94.0 108.3 NA NA NA
3fga 2 Q13362 88.83 0.0 X-RAY
 2009-09-22 ASP B:142 B:165 2.0 0.013 -75.1 113.6 2.0 0.013 0.0 HOH
 9.417
 O
 O
2nyl 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 ASP B:138 B:165 63.0 0.42 T -5.3 128.4 63.0 0.42 0.0
ASP E:138 E:165 63.0 0.42 T -6.4 132.6 NA NA NA
2nym 2 Q13362 90.93 0.0 X-RAY
 2006-12-12 ASP B:138 B:165 64.0 0.427 T -14.9 136.1 64.0 0.427 0.0
ASP E:138 E:165 66.0 0.44 T -12.5 136.9 NA NA NA
5jja 1 Q13362 88.64 0.0 X-RAY
 2016-07-13 ASP A:147 A:175 2.0 0.013 -83.5 115.7 2.0 0.013 0.0 HOH
 4.011
 N
 O
ASP B:147 B:175 1.0 0.007 -81.4 115.2 NA NA NA
6toq 2 Q13362 88.89 0.0 X-RAY
 2020-10-21 ASP B:165 AAA:175 2.0 0.013 -77.1 118.4 2.0 0.013 0.0 HOH
 9.318
 CB
 O
2jak 1 Q13362 88.89 0.0 X-RAY
 2006-12-04 ASP A:187 A:175 0.0 0.0 -90.3 108.8 0.0 0.0 0.0 HOH
 9.983
 O
 O
5k6s 1 Q13362 89.14 0.0 X-RAY
 2016-12-07 ASP A:150 A:175 20.0 0.133 -93.4 115.1 20.0 0.133 0.0
5sw9 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 ASP A:150 A:175 20.0 0.133 -90.3 114.9 20.0 0.133 0.0 HOH
 7.406
 O
 O
5swf 1 Q13362 89.14 0.0 X-RAY
 2016-11-30 ASP A:150 A:175 21.0 0.14 -85.0 114.0 21.0 0.14 0.0
6oyl 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 ASP A:150 A:175 25.0 0.167 -101.7 107.9 25.0 0.167 0.0
6vro 1 Q13362 89.14 0.0 X-RAY
 2020-03-25 ASP A:150 A:175 0.0 0.0 -83.4 113.7 0.0 0.0 0.0 HOH
 5.758
 O
 O
7ouf 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 ASP C:492 F:175 2.0 0.013 -72.8 121.8 2.0 0.013 0.0
ASP H:492 C:175 2.0 0.013 -72.7 121.8 2.0 0.013 0.0
7oug 2 O75475,Q13362 88.89 0.0 EM
 2021-08-18 ASP C:492 F:175 1.0 0.007 -82.7 114.2 1.0 0.007 0.0
ASP H:492 C:175 1.0 0.007 -82.7 114.1 1.0 0.007 0.0
7ouh 2 ? 88.89 0.0 EM
 2021-08-18 ASP C:492 F:175 4.0 0.027 -74.0 124.1 4.0 0.027 0.0
ASP H:492 C:175 4.0 0.027 -74.1 124.1 4.0 0.027 0.0
7pel 2 O75475,Q13362 88.89 0.0 EM
 2021-08-25 ASP C:492 C:175 4.0 0.027 -107.0 132.2 4.0 0.027 0.0
ASP H:492 F:175 3.0 0.02 -107.1 132.2 3.0 0.02 0.0
6voy 2 Q13362 89.21 0.0 EM
 2020-07-01 ASP E:146 E:175 10.0 0.067 -83.4 117.4 10.0 0.067 0.0
ASP F:146 F:175 10.0 0.067 -85.2 117.4 10.0 0.067 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q14738-f1 1 Q14738 100.0 0.0 ASP A:251 A:251 1.0 0.007 -78.9 110.8
af-q13362-f1 1 Q13362 81.45 0.0 ASP A:175 A:175 1.0 0.007 -79.0 111.7